Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TPM3P06753 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.52■■□□□ 1.04
TPM3P06753 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TPM3P06753 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TPM3P06753 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TPM3P06753 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.52■■□□□ 1.03
TPM3P06753 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
TPM3P06753 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TPM3P06753 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.51■■□□□ 1.03
TPM3P06753 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.51■■□□□ 1.03
TPM3P06753 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TPM3P06753 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.51■■□□□ 1.03
TPM3P06753 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TPM3P06753 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TPM3P06753 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.51■■□□□ 1.03
TPM3P06753 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.51■■□□□ 1.03
TPM3P06753 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM3P06753 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.5■■□□□ 1.03
TPM3P06753 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.5■■□□□ 1.03
TPM3P06753 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.5■■□□□ 1.03
TPM3P06753 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.5■■□□□ 1.03
TPM3P06753 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.5■■□□□ 1.03
TPM3P06753 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.5■■□□□ 1.03
TPM3P06753 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.5■■□□□ 1.03
TPM3P06753 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM3P06753 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
TPM3P06753 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
TPM3P06753 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.49■■□□□ 1.03
TPM3P06753 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.49■■□□□ 1.03
TPM3P06753 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.49■■□□□ 1.03
TPM3P06753 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TPM3P06753 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 TEX21P-204ENST00000641479 1693 ntBASIC21.49■■□□□ 1.03
TPM3P06753 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC21.49■■□□□ 1.03
TPM3P06753 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.49■■□□□ 1.03
TPM3P06753 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM3P06753 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TPM3P06753 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 CYP2T3P-201ENST00000601990 817 ntBASIC21.48■■□□□ 1.03
TPM3P06753 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TPM3P06753 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.48■■□□□ 1.03
TPM3P06753 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms