Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.99□□□□□ -0.337e-40■■□□□ 13.7
LARP4Q71RC2 RPS16-206ENST00000601390 2389 ntTSL 210.96□□□□□ -0.667e-40■■□□□ 13.7
LARP4Q71RC2 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.697e-40■■□□□ 13.7
LARP4Q71RC2 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC9.09□□□□□ -0.957e-40■■□□□ 13.7
LARP4Q71RC2 RPS16-204ENST00000599539 555 ntTSL 2 BASIC8.87□□□□□ -0.997e-40■■□□□ 13.7
LARP4Q71RC2 CHURC1-201ENST00000547625 326 ntTSL 30.76□□□□□ -2.299e-7■■□□□ 13.7
LARP4Q71RC2 RPLP0-220ENST00000551217 677 nt8.71□□□□□ -1.021e-19■■□□□ 13.7
LARP4Q71RC2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.95□□□□□ -1.621e-19■■□□□ 13.7
LARP4Q71RC2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.33■■□□□ 1.337e-7■■□□□ 13.7
LARP4Q71RC2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.92■■□□□ 1.17e-7■■□□□ 13.7
LARP4Q71RC2 FPGS-207ENST00000460181 2206 ntTSL 1 (best)19.8■□□□□ 0.767e-7■■□□□ 13.7
LARP4Q71RC2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.687e-7■■□□□ 13.7
LARP4Q71RC2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.24■□□□□ 0.517e-7■■□□□ 13.7
LARP4Q71RC2 FPGS-208ENST00000467826 829 ntTSL 518■□□□□ 0.477e-7■■□□□ 13.7
LARP4Q71RC2 CDK4-207ENST00000550419 919 ntTSL 316.2■□□□□ 0.183e-8■■□□□ 13.7
LARP4Q71RC2 FADS2-213ENST00000523235 5073 ntTSL 213.74□□□□□ -0.213e-13■■□□□ 13.7
LARP4Q71RC2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.44■□□□□ 0.067e-7■■□□□ 13.7
LARP4Q71RC2 MRPS16-205ENST00000479005 2580 ntTSL 214.92□□□□□ -0.027e-7■■□□□ 13.7
LARP4Q71RC2 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.287e-7■■□□□ 13.7
LARP4Q71RC2 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.459e-8■■□□□ 13.7
LARP4Q71RC2 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC11.28□□□□□ -0.69e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-210ENST00000531290 1135 ntTSL 220.28■□□□□ 0.844e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.354e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC12.09□□□□□ -0.474e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC12.03□□□□□ -0.484e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC11.07□□□□□ -0.644e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-213ENST00000533149 1340 ntTSL 210.57□□□□□ -0.724e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-211ENST00000533012 817 ntTSL 210.55□□□□□ -0.724e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-201ENST00000359005 849 ntTSL 2 BASIC10.47□□□□□ -0.734e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-204ENST00000524797 1924 ntTSL 210.19□□□□□ -0.784e-8■■□□□ 13.7
LARP4Q71RC2 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC8.65□□□□□ -1.024e-8■■□□□ 13.7
LARP4Q71RC2 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.361e-14■■□□□ 13.7
LARP4Q71RC2 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.591e-14■■□□□ 13.7
LARP4Q71RC2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.82□□□□□ -1.321e-14■■□□□ 13.7
LARP4Q71RC2 ATP1A1-205ENST00000440951 579 ntTSL 56.25□□□□□ -1.411e-14■■□□□ 13.7
LARP4Q71RC2 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.747e-13■■□□□ 13.7
LARP4Q71RC2 DNAJB11-204ENST00000495390 4079 ntTSL 26.89□□□□□ -1.317e-13■■□□□ 13.7
LARP4Q71RC2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.97■■□□□ 1.279e-16■■□□□ 13.7
LARP4Q71RC2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.259e-16■■□□□ 13.7
LARP4Q71RC2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.139e-16■■□□□ 13.7
LARP4Q71RC2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.139e-16■■□□□ 13.7
LARP4Q71RC2 ATP5G2-203ENST00000495596 1976 ntTSL 1 (best)13.13□□□□□ -0.319e-16■■□□□ 13.7
LARP4Q71RC2 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC11.36□□□□□ -0.599e-16■■□□□ 13.7
LARP4Q71RC2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.51□□□□□ -1.379e-16■■□□□ 13.7
LARP4Q71RC2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.913e-6■■□□□ 13.7
LARP4Q71RC2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.32■□□□□ 0.843e-6■■□□□ 13.7
LARP4Q71RC2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.18■□□□□ 0.826e-8■■□□□ 13.7
LARP4Q71RC2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.553e-6■■□□□ 13.7
LARP4Q71RC2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.493e-6■■□□□ 13.7
LARP4Q71RC2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.413e-6■■□□□ 13.7
LARP4Q71RC2 EEF1D-227ENST00000529576 424 ntTSL 215.06■□□□□ 06e-8■■□□□ 13.7
LARP4Q71RC2 EEF1D-229ENST00000530109 533 ntTSL 214.77□□□□□ -0.056e-8■■□□□ 13.7
LARP4Q71RC2 ARSA-207ENST00000608497 576 ntTSL 312.62□□□□□ -0.393e-6■■□□□ 13.7
LARP4Q71RC2 EEF1D-219ENST00000527741 3718 ntTSL 211.04□□□□□ -0.646e-8■■□□□ 13.7
LARP4Q71RC2 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC11.34□□□□□ -0.593e-6■■□□□ 13.7
LARP4Q71RC2 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.97□□□□□ -0.653e-6■■□□□ 13.7
LARP4Q71RC2 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.61□□□□□ -0.713e-6■■□□□ 13.7
LARP4Q71RC2 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.55□□□□□ -0.723e-6■■□□□ 13.7
LARP4Q71RC2 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.4□□□□□ -0.93e-6■■□□□ 13.7
LARP4Q71RC2 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC9.49□□□□□ -0.892e-6■■□□□ 13.7
LARP4Q71RC2 LINC00470-207ENST00000581430 556 ntTSL 56.45□□□□□ -1.382e-6■■□□□ 13.7
LARP4Q71RC2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.01□□□□□ -0.178e-12■■□□□ 13.7
LARP4Q71RC2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.144e-7■■□□□ 13.7
LARP4Q71RC2 C2-202ENST00000383177 1847 ntTSL 515.2■□□□□ 0.021e-15■■□□□ 13.7
LARP4Q71RC2 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.66□□□□□ -0.221e-15■■□□□ 13.7
LARP4Q71RC2 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.53□□□□□ -0.241e-15■■□□□ 13.7
LARP4Q71RC2 C2-215ENST00000486124 2800 ntTSL 510.64□□□□□ -0.711e-15■■□□□ 13.7
LARP4Q71RC2 C2-210ENST00000468407 694 ntTSL 210.21□□□□□ -0.771e-15■■□□□ 13.7
LARP4Q71RC2 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.921e-15■■□□□ 13.7
LARP4Q71RC2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.05■■□□□ 1.448e-7■■□□□ 13.7
LARP4Q71RC2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.76■□□□□ 0.598e-7■■□□□ 13.7
LARP4Q71RC2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.93■□□□□ 0.148e-7■■□□□ 13.7
LARP4Q71RC2 CALM3-203ENST00000477244 696 ntTSL 310.45□□□□□ -0.748e-7■■□□□ 13.7
LARP4Q71RC2 CALM3-207ENST00000595072 721 ntTSL 210.38□□□□□ -0.758e-7■■□□□ 13.7
LARP4Q71RC2 CALM3-210ENST00000597868 927 ntTSL 39.8□□□□□ -0.848e-7■■□□□ 13.7
LARP4Q71RC2 CALM3-204ENST00000482455 650 ntTSL 47.04□□□□□ -1.288e-7■■□□□ 13.7
LARP4Q71RC2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.711e-6■■□□□ 13.7
LARP4Q71RC2 NDUFB2-205ENST00000464564 469 ntTSL 513.7□□□□□ -0.221e-6■■□□□ 13.7
LARP4Q71RC2 NDUFB2-206ENST00000464566 726 ntTSL 310.35□□□□□ -0.751e-6■■□□□ 13.7
LARP4Q71RC2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.094e-10■■□□□ 13.7
LARP4Q71RC2 AGTRAP-210ENST00000491346 1116 ntTSL 514.81□□□□□ -0.042e-6■■□□□ 13.7
LARP4Q71RC2 AGTRAP-214ENST00000514733 919 ntTSL 312.59□□□□□ -0.392e-6■■□□□ 13.7
LARP4Q71RC2 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.11■□□□□ 0.812e-10■■□□□ 13.7
LARP4Q71RC2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.48□□□□□ -0.414e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.48□□□□□ -0.414e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.48□□□□□ -0.414e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-205ENST00000479021 552 ntTSL 410.13□□□□□ -0.794e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-202ENST00000415933 863 ntTSL 28.54□□□□□ -1.044e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.184e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.64□□□□□ -1.514e-6■■□□□ 13.7
LARP4Q71RC2 PPIA-207ENST00000481437 570 ntTSL 25.64□□□□□ -1.514e-6■■□□□ 13.7
LARP4Q71RC2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.12e-9■■□□□ 13.7
LARP4Q71RC2 TNFRSF12A-203ENST00000571351 1678 ntTSL 219.74■□□□□ 0.752e-9■■□□□ 13.7
LARP4Q71RC2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.67■□□□□ 0.422e-9■■□□□ 13.7
LARP4Q71RC2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.26□□□□□ -0.132e-9■■□□□ 13.7
LARP4Q71RC2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.057e-18■■□□□ 13.7
LARP4Q71RC2 RPL27-202ENST00000586277 460 ntTSL 37.73□□□□□ -1.177e-18■■□□□ 13.7
LARP4Q71RC2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.93□□□□□ -1.622e-19■■□□□ 13.7
LARP4Q71RC2 TMEM14C-202ENST00000466421 472 ntTSL 213.64□□□□□ -0.233e-10■■□□□ 13.7
LARP4Q71RC2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.616e-7■■□□□ 13.7
Retrieved 100 of 15,922 protein–RNA pairs in 162.5 ms