Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 MATR3-238ENST00000512107 579 ntTSL 413.14□□□□□ -0.311e-6■□□□□ 10.9
LSM11P83369 MATR3-231ENST00000502394 589 ntTSL 413.12□□□□□ -0.311e-6■□□□□ 10.9
LSM11P83369 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.26□□□□□ -0.451e-6■□□□□ 10.9
LSM11P83369 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.511e-6■□□□□ 10.9
LSM11P83369 MATR3-236ENST00000509644 750 ntTSL 311.3□□□□□ -0.61e-6■□□□□ 10.9
LSM11P83369 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.191e-6■□□□□ 10.9
LSM11P83369 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.56□□□□□ -1.21e-6■□□□□ 10.9
LSM11P83369 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.25□□□□□ -1.571e-6■□□□□ 10.9
LSM11P83369 CHKB-207ENST00000476289 1010 ntTSL 527.85■■■□□ 2.056e-6■□□□□ 10.9
LSM11P83369 ABCA7-215ENST00000531478 725 ntTSL 317.77■□□□□ 0.449e-11■□□□□ 10.9
LSM11P83369 EIF1-202ENST00000462917 2170 ntTSL 1 (best)17.29■□□□□ 0.366e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.22■□□□□ 0.356e-6■□□□□ 10.9
LSM11P83369 MAN2C1-236ENST00000567360 457 ntTSL 217.02■□□□□ 0.323e-8■□□□□ 10.9
LSM11P83369 ZSWIM8-208ENST00000466354 630 ntTSL 316.8■□□□□ 0.286e-6■□□□□ 10.9
LSM11P83369 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.136e-6■□□□□ 10.9
LSM11P83369 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.097e-7■□□□□ 10.9
LSM11P83369 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.066e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.44■□□□□ 0.066e-6■□□□□ 10.9
LSM11P83369 SNHG11-213ENST00000453698 1322 ntTSL 515.29■□□□□ 0.046e-6■□□□□ 10.9
LSM11P83369 SNHG11-215ENST00000483342 1509 ntTSL 1 (best)15.26■□□□□ 0.036e-6■□□□□ 10.9
LSM11P83369 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.22■□□□□ 0.036e-6■□□□□ 10.9
LSM11P83369 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.22■□□□□ 0.036e-6■□□□□ 10.9
LSM11P83369 SNHG11-202ENST00000400436 2652 ntTSL 214.79□□□□□ -0.046e-6■□□□□ 10.9
LSM11P83369 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.63□□□□□ -0.076e-6■□□□□ 10.9
LSM11P83369 CHKB-202ENST00000463053 886 ntTSL 314.45□□□□□ -0.16e-6■□□□□ 10.9
LSM11P83369 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.29□□□□□ -0.126e-6■□□□□ 10.9
LSM11P83369 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.15□□□□□ -0.146e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.15□□□□□ -0.146e-6■□□□□ 10.9
LSM11P83369 RBCK1-214ENST00000621487 473 ntTSL 214.02□□□□□ -0.176e-6■□□□□ 10.9
LSM11P83369 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.216e-6■□□□□ 10.9
LSM11P83369 SNHG11-208ENST00000437028 1169 ntTSL 313.46□□□□□ -0.256e-6■□□□□ 10.9
LSM11P83369 EME2-202ENST00000561903 4586 ntTSL 213.37□□□□□ -0.276e-6■□□□□ 10.9
LSM11P83369 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.276e-6■□□□□ 10.9
LSM11P83369 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.25□□□□□ -0.296e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.316e-6■□□□□ 10.9
LSM11P83369 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.11□□□□□ -0.312e-8■□□□□ 10.9
LSM11P83369 SMPD4-219ENST00000491128 2570 ntTSL 1 (best)12.96□□□□□ -0.336e-6■□□□□ 10.9
LSM11P83369 CMTR1-203ENST00000457419 769 ntTSL 312.9□□□□□ -0.346e-6■□□□□ 10.9
LSM11P83369 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.357e-7■□□□□ 10.9
LSM11P83369 UQCC1-215ENST00000472559 1921 ntTSL 1 (best)12.38□□□□□ -0.432e-8■□□□□ 10.9
LSM11P83369 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.57e-7■□□□□ 10.9
LSM11P83369 UQCC1-206ENST00000374394 2329 ntTSL 211.55□□□□□ -0.562e-8■□□□□ 10.9
LSM11P83369 UQCC1-214ENST00000457259 1987 ntTSL 1 (best)11.45□□□□□ -0.582e-8■□□□□ 10.9
LSM11P83369 SMPD4-213ENST00000454468 3586 ntTSL 1 (best)11.35□□□□□ -0.596e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-202ENST00000412198 3611 ntTSL 211.33□□□□□ -0.66e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-212ENST00000492395 4490 ntTSL 1 (best)11.24□□□□□ -0.616e-6■□□□□ 10.9
LSM11P83369 ZSWIM8-214ENST00000603187 3713 ntTSL 1 (best)11.21□□□□□ -0.616e-6■□□□□ 10.9
LSM11P83369 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC11.12□□□□□ -0.632e-8■□□□□ 10.9
LSM11P83369 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.637e-7■□□□□ 10.9
LSM11P83369 SMPD4-209ENST00000439886 3371 ntTSL 211.09□□□□□ -0.636e-6■□□□□ 10.9
LSM11P83369 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC11.04□□□□□ -0.642e-8■□□□□ 10.9
LSM11P83369 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.696e-6■□□□□ 10.9
LSM11P83369 CMTR1-201ENST00000373451 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.716e-6■□□□□ 10.9
LSM11P83369 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC10.59□□□□□ -0.716e-6■□□□□ 10.9
LSM11P83369 PRPSAP1-203ENST00000435555 916 ntTSL 510.55□□□□□ -0.721e-10■□□□□ 10.9
LSM11P83369 PRPSAP1-212ENST00000592474 1898 nt10.53□□□□□ -0.721e-10■□□□□ 10.9
LSM11P83369 SNHG11-210ENST00000442419 741 ntTSL 310.48□□□□□ -0.736e-6■□□□□ 10.9
LSM11P83369 SMPD4-218ENST00000482171 4298 ntTSL 210.33□□□□□ -0.766e-6■□□□□ 10.9
LSM11P83369 KDM5D-209ENST00000492117 5235 ntTSL 210.32□□□□□ -0.766e-6■□□□□ 10.9
LSM11P83369 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.766e-6■□□□□ 10.9
LSM11P83369 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC10.27□□□□□ -0.772e-8■□□□□ 10.9
LSM11P83369 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.86e-6■□□□□ 10.9
LSM11P83369 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.822e-8■□□□□ 10.9
LSM11P83369 SMPD4-206ENST00000433118 3335 ntTSL 59.94□□□□□ -0.826e-6■□□□□ 10.9
LSM11P83369 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC9.89□□□□□ -0.836e-6■□□□□ 10.9
LSM11P83369 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC9.89□□□□□ -0.836e-6■□□□□ 10.9
LSM11P83369 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC9.88□□□□□ -0.836e-6■□□□□ 10.9
LSM11P83369 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC9.67□□□□□ -0.866e-6■□□□□ 10.9
LSM11P83369 KDM5D-206ENST00000469599 5501 ntTSL 29.54□□□□□ -0.886e-6■□□□□ 10.9
LSM11P83369 KLC4-209ENST00000467906 3604 ntTSL 29.16□□□□□ -0.947e-7■□□□□ 10.9
LSM11P83369 SMPD4-203ENST00000412570 3601 ntTSL 29.11□□□□□ -0.956e-6■□□□□ 10.9
LSM11P83369 PRPSAP1-208ENST00000488339 443 ntTSL 28.78□□□□□ -11e-10■□□□□ 10.9
LSM11P83369 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC8.71□□□□□ -1.016e-6■□□□□ 10.9
LSM11P83369 EIF1-201ENST00000310837 1120 ntTSL 1 (best)8.11□□□□□ -1.116e-6■□□□□ 10.9
LSM11P83369 C14orf37-203ENST00000554218 572 ntTSL 47.02□□□□□ -1.296e-6■□□□□ 10.9
LSM11P83369 EIF1-205ENST00000482111 1428 ntTSL 26.63□□□□□ -1.356e-6■□□□□ 10.9
LSM11P83369 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.386e-6■□□□□ 10.9
LSM11P83369 PDE8A-214ENST00000561024 2601 ntTSL 1 (best)4.42□□□□□ -1.76e-6■□□□□ 10.9
LSM11P83369 RBM39-212ENST00000429968 2149 ntTSL 213.19□□□□□ -0.31e-13■□□□□ 10.9
LSM11P83369 RBM39-216ENST00000444878 2124 ntTSL 212.77□□□□□ -0.371e-13■□□□□ 10.9
LSM11P83369 SGPL1-204ENST00000486993 537 ntTSL 1 (best)17.94■□□□□ 0.462e-9■□□□□ 10.9
LSM11P83369 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.772e-9■□□□□ 10.9
LSM11P83369 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.09■□□□□ 0.013e-7■□□□□ 10.9
LSM11P83369 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.98□□□□□ -0.013e-7■□□□□ 10.9
LSM11P83369 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-7■□□□□ 10.9
LSM11P83369 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.083e-7■□□□□ 10.9
LSM11P83369 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.073e-7■□□□□ 10.9
LSM11P83369 C17orf99-202ENST00000451352 2404 ntTSL 213.39□□□□□ -0.273e-7■□□□□ 10.9
LSM11P83369 C17orf99-204ENST00000586246 371 ntTSL 511.82□□□□□ -0.523e-7■□□□□ 10.9
LSM11P83369 C17orf99-203ENST00000586029 694 ntAPPRIS ALT2 TSL 311.36□□□□□ -0.593e-7■□□□□ 10.9
LSM11P83369 SNORD88B-201ENST00000408454 91 ntBASIC11.21□□□□□ -0.613e-7■□□□□ 10.9
LSM11P83369 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.623e-7■□□□□ 10.9
LSM11P83369 C17orf99-201ENST00000340363 984 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.753e-7■□□□□ 10.9
LSM11P83369 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.843e-7■□□□□ 10.9
LSM11P83369 SLC43A3-226ENST00000625097 1796 nt9.37□□□□□ -0.913e-7■□□□□ 10.9
LSM11P83369 BRD2-211ENST00000482838 759 ntTSL 25.46□□□□□ -1.546e-8■□□□□ 10.9
LSM11P83369 HGD-209ENST00000492108 631 ntTSL 26.57□□□□□ -1.364e-9■□□□□ 10.9
LSM11P83369 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)7.88□□□□□ -1.152e-7■□□□□ 10.9
LSM11P83369 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.148e-29■□□□□ 10.8
LSM11P83369 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.21■□□□□ 0.992e-8■□□□□ 10.8
Retrieved 100 of 11,495 protein–RNA pairs in 64.5 ms