RNA–Protein interactions for RNA: ENST00000373451.8

CMTR1-201, Transcript of cap methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTR1, Length 4,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1-201ENST00000373451 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
CMTR1-201ENST00000373451 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
CMTR1-201ENST00000373451 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
CMTR1-201ENST00000373451 ZCCHC6Q5VYS8 1495 aaKnown RBP19.78■□□□□ 0.76
CMTR1-201ENST00000373451 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
CMTR1-201ENST00000373451 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
CMTR1-201ENST00000373451 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
CMTR1-201ENST00000373451 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
CMTR1-201ENST00000373451 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
CMTR1-201ENST00000373451 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CMTR1-201ENST00000373451 ABCC9O60706 1549 aa18.66■□□□□ 0.58
CMTR1-201ENST00000373451 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
CMTR1-201ENST00000373451 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
CMTR1-201ENST00000373451 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
CMTR1-201ENST00000373451 NACADO15069 1562 aa18.35■□□□□ 0.53
CMTR1-201ENST00000373451 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
CMTR1-201ENST00000373451 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
CMTR1-201ENST00000373451 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
CMTR1-201ENST00000373451 HRCP23327 699 aa18.23■□□□□ 0.51
CMTR1-201ENST00000373451 WIZO95785 1651 aa18.15■□□□□ 0.5
CMTR1-201ENST00000373451 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
CMTR1-201ENST00000373451 FAM9AQ8IZU1 332 aaPredicted RBP18.05■□□□□ 0.48
CMTR1-201ENST00000373451 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
CMTR1-201ENST00000373451 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
CMTR1-201ENST00000373451 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.46
CMTR1-201ENST00000373451 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
CMTR1-201ENST00000373451 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
CMTR1-201ENST00000373451 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
CMTR1-201ENST00000373451 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
CMTR1-201ENST00000373451 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
CMTR1-201ENST00000373451 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
CMTR1-201ENST00000373451 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
CMTR1-201ENST00000373451 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
CMTR1-201ENST00000373451 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
CMTR1-201ENST00000373451 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
CMTR1-201ENST00000373451 SOGA1O94964 1423 aa17.54■□□□□ 0.4
CMTR1-201ENST00000373451 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
CMTR1-201ENST00000373451 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
CMTR1-201ENST00000373451 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
CMTR1-201ENST00000373451 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
CMTR1-201ENST00000373451 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
CMTR1-201ENST00000373451 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
CMTR1-201ENST00000373451 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
CMTR1-201ENST00000373451 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
CMTR1-201ENST00000373451 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
CMTR1-201ENST00000373451 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
CMTR1-201ENST00000373451 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
CMTR1-201ENST00000373451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
CMTR1-201ENST00000373451 EEA1Q15075 1411 aa17.26■□□□□ 0.35
CMTR1-201ENST00000373451 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
CMTR1-201ENST00000373451 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
CMTR1-201ENST00000373451 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
CMTR1-201ENST00000373451 KIF21BO75037 1637 aa17.12■□□□□ 0.33
CMTR1-201ENST00000373451 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
CMTR1-201ENST00000373451 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
CMTR1-201ENST00000373451 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
CMTR1-201ENST00000373451 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
CMTR1-201ENST00000373451 CLIP1P30622 1438 aa17.04■□□□□ 0.32
CMTR1-201ENST00000373451 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
CMTR1-201ENST00000373451 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
CMTR1-201ENST00000373451 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
CMTR1-201ENST00000373451 HMGXB3Q12766 1538 aa17■□□□□ 0.31
CMTR1-201ENST00000373451 CUX1P39880 1505 aa16.96■□□□□ 0.31
CMTR1-201ENST00000373451 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
CMTR1-201ENST00000373451 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
CMTR1-201ENST00000373451 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
CMTR1-201ENST00000373451 CFTRP13569 1480 aa16.89■□□□□ 0.29
CMTR1-201ENST00000373451 MYT1Q01538 1121 aa16.86■□□□□ 0.29
CMTR1-201ENST00000373451 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
CMTR1-201ENST00000373451 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.29
CMTR1-201ENST00000373451 ARAP1Q96P48 1450 aa16.83■□□□□ 0.29
CMTR1-201ENST00000373451 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
CMTR1-201ENST00000373451 KIF27Q86VH2 1401 aa16.77■□□□□ 0.28
CMTR1-201ENST00000373451 KANK4Q5T7N3 995 aaPredicted RBP16.76■□□□□ 0.27
CMTR1-201ENST00000373451 APLP2Q06481 763 aa16.75■□□□□ 0.27
CMTR1-201ENST00000373451 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
CMTR1-201ENST00000373451 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
CMTR1-201ENST00000373451 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
CMTR1-201ENST00000373451 CUX2O14529 1486 aa16.67■□□□□ 0.26
CMTR1-201ENST00000373451 NEUROD1Q13562 356 aa16.67■□□□□ 0.26
CMTR1-201ENST00000373451 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
CMTR1-201ENST00000373451 IGF1RP08069 1367 aa16.66■□□□□ 0.26
CMTR1-201ENST00000373451 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
CMTR1-201ENST00000373451 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
CMTR1-201ENST00000373451 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
CMTR1-201ENST00000373451 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
CMTR1-201ENST00000373451 RRBP1Q9P2E9 1410 aaKnown RBP16.56■□□□□ 0.24
CMTR1-201ENST00000373451 CARMIL1Q5VZK9 1371 aa16.55■□□□□ 0.24
CMTR1-201ENST00000373451 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
CMTR1-201ENST00000373451 NESP48681 1621 aa16.54■□□□□ 0.24
CMTR1-201ENST00000373451 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
CMTR1-201ENST00000373451 MIER1Q8N108 512 aa16.5■□□□□ 0.23
CMTR1-201ENST00000373451 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
CMTR1-201ENST00000373451 ITGAEP38570 1179 aa16.48■□□□□ 0.23
CMTR1-201ENST00000373451 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
CMTR1-201ENST00000373451 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
CMTR1-201ENST00000373451 P3H3Q8IVL6 736 aa16.46■□□□□ 0.22
CMTR1-201ENST00000373451 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
CMTR1-201ENST00000373451 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
CMTR1-201ENST00000373451 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms