Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH8P55286 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH8P55286 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH8P55286 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH8P55286 AC079598.2-202ENST00000546624 1451 ntBASIC20.55■□□□□ 0.88
CDH8P55286 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH8P55286 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH8P55286 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH8P55286 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDH8P55286 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH8P55286 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH8P55286 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDH8P55286 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH8P55286 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH8P55286 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH8P55286 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH8P55286 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CDH8P55286 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH8P55286 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH8P55286 AP000525.1-201ENST00000608286 694 ntBASIC20.53■□□□□ 0.88
CDH8P55286 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH8P55286 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH8P55286 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 AC005332.7-201ENST00000614046 2005 ntBASIC20.53■□□□□ 0.88
CDH8P55286 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH8P55286 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH8P55286 TEX21P-204ENST00000641479 1693 ntBASIC20.52■□□□□ 0.88
CDH8P55286 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH8P55286 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH8P55286 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH8P55286 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH8P55286 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH8P55286 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH8P55286 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH8P55286 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH8P55286 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH8P55286 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH8P55286 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.52■□□□□ 0.88
CDH8P55286 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH8P55286 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH8P55286 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH8P55286 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH8P55286 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDH8P55286 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH8P55286 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CDH8P55286 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH8P55286 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH8P55286 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH8P55286 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDH8P55286 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH8P55286 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH8P55286 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.51■□□□□ 0.87
CDH8P55286 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDH8P55286 AL390955.1-201ENST00000428694 934 ntBASIC20.51■□□□□ 0.87
CDH8P55286 FAM207BP-201ENST00000447172 505 ntBASIC20.51■□□□□ 0.87
CDH8P55286 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH8P55286 AP000692.2-201ENST00000608391 879 ntBASIC20.51■□□□□ 0.87
CDH8P55286 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CDH8P55286 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH8P55286 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CDH8P55286 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH8P55286 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH8P55286 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDH8P55286 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 UNC93B2-201ENST00000285383 730 ntBASIC20.5■□□□□ 0.87
CDH8P55286 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDH8P55286 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms