Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.14e-9■■■□□ 14.6
SUB1P53999 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.874e-9■■■□□ 14.6
SUB1P53999 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.384e-9■■■□□ 14.6
SUB1P53999 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.384e-9■■■□□ 14.6
SUB1P53999 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.384e-9■■■□□ 14.6
SUB1P53999 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.434e-9■■■□□ 14.6
SUB1P53999 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.464e-9■■■□□ 14.6
SUB1P53999 MTHFD2-208ENST00000489041 1135 ntTSL 25.99□□□□□ -1.457e-7■■■□□ 14.6
SUB1P53999 MTHFD2-205ENST00000470592 1396 ntTSL 25.98□□□□□ -1.457e-7■■■□□ 14.6
SUB1P53999 CCT6A-207ENST00000492618 692 ntTSL 37.21□□□□□ -1.262e-7■■■□□ 14.6
SUB1P53999 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.832e-6■■■□□ 14.6
SUB1P53999 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.79□□□□□ -1.962e-6■■■□□ 14.6
SUB1P53999 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.45□□□□□ -2.022e-6■■■□□ 14.6
SUB1P53999 KNTC1-211ENST00000541427 641 ntTSL 22.25□□□□□ -2.052e-6■■■□□ 14.6
SUB1P53999 KNTC1-215ENST00000546125 624 ntTSL 51.75□□□□□ -2.132e-6■■■□□ 14.6
SUB1P53999 RPLP0-206ENST00000546990 770 ntTSL 310.96□□□□□ -0.652e-7■■■□□ 14.6
SUB1P53999 RPLP0-221ENST00000551258 966 ntTSL 57.88□□□□□ -1.152e-7■■■□□ 14.6
SUB1P53999 NDUFA4-204ENST00000482299 606 ntTSL 22.17□□□□□ -2.063e-9■■■□□ 14.6
SUB1P53999 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.53□□□□□ -1.524e-10■■■□□ 14.6
SUB1P53999 UQCRC2-205ENST00000563898 1406 ntTSL 54.56□□□□□ -1.684e-10■■■□□ 14.6
SUB1P53999 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.142e-6■■□□□ 14.5
SUB1P53999 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.682e-6■■□□□ 14.5
SUB1P53999 PSMD11-203ENST00000469475 473 ntTSL 210.69□□□□□ -0.72e-6■■□□□ 14.5
SUB1P53999 PSMD11-205ENST00000493026 2387 ntTSL 210.3□□□□□ -0.762e-6■■□□□ 14.5
SUB1P53999 PSMD11-211ENST00000585265 670 ntTSL 29.53□□□□□ -0.882e-6■■□□□ 14.5
SUB1P53999 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.377e-7■■□□□ 14.5
SUB1P53999 PPA1-204ENST00000495346 282 ntTSL 31.67□□□□□ -2.142e-6■■□□□ 14.5
SUB1P53999 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.128e-7■■□□□ 14.5
SUB1P53999 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.278e-7■■□□□ 14.5
SUB1P53999 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.513e-6■■□□□ 14.5
SUB1P53999 MACF1-205ENST00000372925 14496 ntTSL 55.46□□□□□ -1.543e-6■■□□□ 14.5
SUB1P53999 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.32□□□□□ -1.723e-6■■□□□ 14.5
SUB1P53999 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.83e-6■■□□□ 14.5
SUB1P53999 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.853e-6■■□□□ 14.5
SUB1P53999 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.893e-6■■□□□ 14.5
SUB1P53999 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.62e-6■■□□□ 14.5
SUB1P53999 CLNS1A-207ENST00000527133 667 ntTSL 39.2□□□□□ -0.942e-6■■□□□ 14.5
SUB1P53999 RPL14-207ENST00000465325 788 ntTSL 34.24□□□□□ -1.731e-323■■□□□ 14.5
SUB1P53999 RHOT2-227ENST00000602564 3695 ntTSL 512.06□□□□□ -0.485e-7■■□□□ 14.5
SUB1P53999 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.341e-6■■□□□ 14.5
SUB1P53999 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.411e-6■■□□□ 14.5
SUB1P53999 CPSF1-205ENST00000531042 580 ntTSL 511.6□□□□□ -0.551e-6■■□□□ 14.5
SUB1P53999 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.952e-6■■□□□ 14.5
SUB1P53999 SSR3-203ENST00000464138 533 ntTSL 33.73□□□□□ -1.813e-10■■□□□ 14.5
SUB1P53999 EGFL7-206ENST00000492002 654 ntTSL 516.84■□□□□ 0.292e-6■■□□□ 14.5
SUB1P53999 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 02e-6■■□□□ 14.5
SUB1P53999 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.152e-8■■□□□ 14.4
SUB1P53999 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.91e-6■■□□□ 14.4
SUB1P53999 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.61□□□□□ -1.831e-6■■□□□ 14.4
SUB1P53999 SLC6A8-208ENST00000467402 308 ntTSL 58.69□□□□□ -1.021e-8■■□□□ 14.4
SUB1P53999 DAZAP1-208ENST00000589874 3642 nt11.22□□□□□ -0.614e-25■■□□□ 14.4
SUB1P53999 DAZAP1-203ENST00000585485 3943 ntTSL 210.79□□□□□ -0.684e-25■■□□□ 14.4
SUB1P53999 DAZAP1-207ENST00000589484 3414 ntTSL 210.27□□□□□ -0.774e-25■■□□□ 14.4
SUB1P53999 NDUFB9-203ENST00000517830 320 ntTSL 36.75□□□□□ -1.331e-7■■□□□ 14.4
SUB1P53999 NDUFB9-207ENST00000524241 654 ntTSL 25.64□□□□□ -1.511e-7■■□□□ 14.4
SUB1P53999 VWDE-204ENST00000485526 573 ntTSL 20.92□□□□□ -2.267e-8■■□□□ 14.4
SUB1P53999 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.112e-7■■□□□ 14.4
SUB1P53999 ALDH9A1-203ENST00000463610 559 ntTSL 26.17□□□□□ -1.426e-8■■□□□ 14.3
SUB1P53999 TUBA1B-206ENST00000550367 835 ntTSL 36.68□□□□□ -1.343e-13■■□□□ 14.3
SUB1P53999 EIF4A1-216ENST00000580888 710 ntTSL 214.13□□□□□ -0.152e-6■■□□□ 14.3
SUB1P53999 EIF4A1-236ENST00000584901 1021 ntTSL 28.81□□□□□ -12e-6■■□□□ 14.3
SUB1P53999 EIF4A1-223ENST00000582169 552 ntTSL 48.39□□□□□ -1.072e-6■■□□□ 14.3
SUB1P53999 EIF4A1-229ENST00000583802 563 ntTSL 48.39□□□□□ -1.072e-6■■□□□ 14.3
SUB1P53999 EIF4A1-226ENST00000582848 591 ntTSL 38.08□□□□□ -1.122e-6■■□□□ 14.3
SUB1P53999 EIF4A1-233ENST00000584784 818 ntTSL 57.73□□□□□ -1.172e-6■■□□□ 14.3
SUB1P53999 EIF4A1-209ENST00000578495 916 ntTSL 56.19□□□□□ -1.422e-6■■□□□ 14.3
SUB1P53999 EIF4A1-237ENST00000585024 577 ntTSL 46.14□□□□□ -1.432e-6■■□□□ 14.3
SUB1P53999 EIF4A1-230ENST00000583899 665 ntTSL 34.82□□□□□ -1.642e-6■■□□□ 14.3
SUB1P53999 EIF4A1-211ENST00000578754 547 ntTSL 44.1□□□□□ -1.752e-6■■□□□ 14.3
SUB1P53999 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.68□□□□□ -0.222e-9■■□□□ 14.3
SUB1P53999 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC8.84□□□□□ -0.992e-9■■□□□ 14.3
SUB1P53999 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.11e-9■■□□□ 14.2
SUB1P53999 GNAI2-205ENST00000441156 2168 ntTSL 219.08■□□□□ 0.641e-9■■□□□ 14.2
SUB1P53999 ADD1-215ENST00000510101 704 ntTSL 318.58■□□□□ 0.562e-7■■□□□ 14.2
SUB1P53999 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.531e-12■■□□□ 14.2
SUB1P53999 NUP210-202ENST00000420141 3134 ntTSL 1 (best)18.27■□□□□ 0.513e-6■■□□□ 14.2
SUB1P53999 ADD1-213ENST00000508684 3059 ntTSL 216.8■□□□□ 0.282e-7■■□□□ 14.2
SUB1P53999 ZNF496-205ENST00000478225 1007 ntTSL 216.28■□□□□ 0.22e-7■■□□□ 14.2
SUB1P53999 ZNF496-204ENST00000477903 907 ntTSL 315.77■□□□□ 0.122e-7■■□□□ 14.2
SUB1P53999 ARL6IP6-205ENST00000495469 1308 ntTSL 215.6■□□□□ 0.092e-7■■□□□ 14.2
SUB1P53999 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.052e-7■■□□□ 14.2
SUB1P53999 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.1□□□□□ -0.151e-9■■□□□ 14.2
SUB1P53999 HSPG2-208ENST00000471322 1602 ntTSL 513.99□□□□□ -0.172e-7■■□□□ 14.2
SUB1P53999 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-7■■□□□ 14.2
SUB1P53999 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.192e-7■■□□□ 14.2
SUB1P53999 GET4-206ENST00000464468 676 ntTSL 313.2□□□□□ -0.31e-12■■□□□ 14.2
SUB1P53999 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)12.91□□□□□ -0.342e-7■■□□□ 14.2
SUB1P53999 SUN1-222ENST00000457861 2975 ntTSL 212.84□□□□□ -0.351e-12■■□□□ 14.2
SUB1P53999 MSH5-SAPCD1-206ENST00000491552 706 ntTSL 312.44□□□□□ -0.422e-7■■□□□ 14.2
SUB1P53999 GNAI2-206ENST00000446079 2086 ntTSL 1 (best)12.41□□□□□ -0.421e-9■■□□□ 14.2
SUB1P53999 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.25□□□□□ -0.452e-7■■□□□ 14.2
SUB1P53999 PPM1F-204ENST00000424647 576 ntTSL 212.19□□□□□ -0.462e-7■■□□□ 14.2
SUB1P53999 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.461e-12■■□□□ 14.2
SUB1P53999 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.482e-7■■□□□ 14.2
SUB1P53999 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.482e-7■■□□□ 14.2
SUB1P53999 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.01□□□□□ -0.492e-7■■□□□ 14.2
SUB1P53999 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.512e-7■■□□□ 14.2
SUB1P53999 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.522e-7■■□□□ 14.2
SUB1P53999 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.55□□□□□ -0.562e-7■■□□□ 14.2
SUB1P53999 MSH5-206ENST00000423982 2706 ntTSL 511.39□□□□□ -0.592e-7■■□□□ 14.2
Retrieved 100 of 11,644 protein–RNA pairs in 183.8 ms