RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	MYT1	Q01538	1121 aa		7.47	□□□□□ -1.21
MACF1-231	ENST00000564288	PELP1	Q8IZL8	1130 aa	Known RBP	7.43	□□□□□ -1.22
MACF1-231	ENST00000564288	NISCH	Q9Y2I1	1504 aa		7.01	□□□□□ -1.29
MACF1-231	ENST00000564288	TTBK1	Q5TCY1	1321 aa	Predicted RBP	6.94	□□□□□ -1.3
MACF1-231	ENST00000564288	ZEB1	P37275	1124 aa	Predicted RBP	6.84	□□□□□ -1.31
MACF1-231	ENST00000564288	CENPB	P07199	599 aa	Predicted RBP	6.69	□□□□□ -1.34
MACF1-231	ENST00000564288	HRC	P23327	699 aa		6.66	□□□□□ -1.34
MACF1-231	ENST00000564288	ERICH6	Q7L0X2	663 aa		6.61	□□□□□ -1.35
MACF1-231	ENST00000564288	PCGF6	Q9BYE7	350 aa		6.58	□□□□□ -1.36
MACF1-231	ENST00000564288	CCER1	Q8TC90	406 aa	Predicted RBP	6.58	□□□□□ -1.36
MACF1-231	ENST00000564288	YTHDC1	Q96MU7	727 aa	Known RBP	6.45	□□□□□ -1.38
MACF1-231	ENST00000564288	TRIM26	Q12899	539 aa	Predicted RBP	6.44	□□□□□ -1.38
MACF1-231	ENST00000564288	MYT1L	Q9UL68	1186 aa		6.38	□□□□□ -1.39
MACF1-231	ENST00000564288	CLSPN	Q9HAW4	1339 aa		6.38	□□□□□ -1.39
MACF1-231	ENST00000564288	SUPT5H	O00267	1087 aa	Known RBP	6.37	□□□□□ -1.39
MACF1-231	ENST00000564288	ACIN1	Q9UKV3	1341 aa	Known RBP	6.32	□□□□□ -1.4
MACF1-231	ENST00000564288	GTF3C3	Q9Y5Q9	886 aa		6.26	□□□□□ -1.41
MACF1-231	ENST00000564288	NEFL	P07196	543 aa		6.26	□□□□□ -1.41
MACF1-231	ENST00000564288	DIEXF	Q68CQ4	756 aa	Known RBP	6.24	□□□□□ -1.41
MACF1-231	ENST00000564288	PPARGC1B	Q86YN6	1023 aa	Known RBP	6.19	□□□□□ -1.42
MACF1-231	ENST00000564288	DCAF8L2	P0C7V8	631 aa		6.18	□□□□□ -1.42
MACF1-231	ENST00000564288	APLP2	Q06481	763 aa		6.17	□□□□□ -1.42
MACF1-231	ENST00000564288	GLIPR1L2	Q4G1C9	344 aa		6.16	□□□□□ -1.42
MACF1-231	ENST00000564288	ANP32E	Q9BTT0	268 aa		6.14	□□□□□ -1.43
MACF1-231	ENST00000564288	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.14	□□□□□ -1.43
MACF1-231	ENST00000564288	SCAF1	Q9H7N4	1312 aa	Known RBP	6.14	□□□□□ -1.43
MACF1-231	ENST00000564288	ZNF316	A6NFI3	1004 aa	Predicted RBP	6.12	□□□□□ -1.43
MACF1-231	ENST00000564288	CCDC180	Q9P1Z9	1646 aa		6.11	□□□□□ -1.43
MACF1-231	ENST00000564288	DCAF1	Q9Y4B6	1507 aa		6.11	□□□□□ -1.43
MACF1-231	ENST00000564288	DAXX	Q9UER7	740 aa	Predicted RBP	6.11	□□□□□ -1.43
MACF1-231	ENST00000564288	CHIC1	Q5VXU3	224 aa		6.09	□□□□□ -1.43
MACF1-231	ENST00000564288	RTL5	Q5HYW3	569 aa	Predicted RBP	6.08	□□□□□ -1.44
MACF1-231	ENST00000564288	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.08	□□□□□ -1.44
MACF1-231	ENST00000564288	SHROOM4	Q9ULL8	1493 aa		6.07	□□□□□ -1.44
MACF1-231	ENST00000564288	NEUROD1	Q13562	356 aa		6.06	□□□□□ -1.44
MACF1-231	ENST00000564288	LOC105371045	A0A1W2PR82	267 aa		6.06	□□□□□ -1.44
MACF1-231	ENST00000564288	BCL11A	Q9H165	835 aa		6.05	□□□□□ -1.44
MACF1-231	ENST00000564288	TRIM41	Q8WV44	630 aa		6.04	□□□□□ -1.44
MACF1-231	ENST00000564288	MYO15B	Q96JP2	1530 aa		6.03	□□□□□ -1.44
MACF1-231	ENST00000564288	ERICH6B	Q5W0A0	696 aa		5.99	□□□□□ -1.45
MACF1-231	ENST00000564288	EEA1	Q15075	1411 aa		5.99	□□□□□ -1.45
MACF1-231	ENST00000564288	ZCCHC6	Q5VYS8	1495 aa	Known RBP	5.97	□□□□□ -1.45
MACF1-231	ENST00000564288	RANGAP1	P46060	587 aa	Predicted RBP	5.96	□□□□□ -1.46
MACF1-231	ENST00000564288	EIF5B	O60841	1220 aa	Known RBP	5.95	□□□□□ -1.46
MACF1-231	ENST00000564288	ZBTB47	Q9UFB7	747 aa	Predicted RBP	5.95	□□□□□ -1.46
MACF1-231	ENST00000564288	NCL	P19338	710 aa	Known RBP	5.94	□□□□□ -1.46
MACF1-231	ENST00000564288	SLC24A1	O60721	1099 aa		5.9	□□□□□ -1.47
MACF1-231	ENST00000564288	ANP32A	P39687	249 aa	Known RBP	5.9	□□□□□ -1.47
MACF1-231	ENST00000564288	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	5.89	□□□□□ -1.47
MACF1-231	ENST00000564288	TNNT2	P45379	298 aa	Predicted RBP	5.87	□□□□□ -1.47
MACF1-231	ENST00000564288	ANP32C	O43423	234 aa		5.87	□□□□□ -1.47
MACF1-231	ENST00000564288	MIER1	Q8N108	512 aa		5.87	□□□□□ -1.47
MACF1-231	ENST00000564288	FKBP8	Q14318	412 aa		5.86	□□□□□ -1.47
MACF1-231	ENST00000564288	PPM1G	O15355	546 aa	Predicted RBP	5.85	□□□□□ -1.47
MACF1-231	ENST00000564288	UBTF	P17480	764 aa	Known RBP	5.85	□□□□□ -1.47
MACF1-231	ENST00000564288	RBM19	Q9Y4C8	960 aa	Known RBP	5.85	□□□□□ -1.47
MACF1-231	ENST00000564288	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.84	□□□□□ -1.47
MACF1-231	ENST00000564288	USP35	Q9P2H5	1018 aa		5.84	□□□□□ -1.48
MACF1-231	ENST00000564288	RSPH6A	Q9H0K4	717 aa		5.82	□□□□□ -1.48
MACF1-231	ENST00000564288	DEK	P35659	375 aa	Known RBP	5.82	□□□□□ -1.48
MACF1-231	ENST00000564288	CSRNP3	Q8WYN3	585 aa		5.82	□□□□□ -1.48
MACF1-231	ENST00000564288	ANP32B	Q92688	251 aa	Known RBP	5.81	□□□□□ -1.48
MACF1-231	ENST00000564288	EHMT2	Q96KQ7	1210 aa		5.79	□□□□□ -1.48
MACF1-231	ENST00000564288	DDRGK1	Q96HY6	314 aa		5.79	□□□□□ -1.48
MACF1-231	ENST00000564288	TSHZ2	Q9NRE2	1034 aa		5.79	□□□□□ -1.48
MACF1-231	ENST00000564288	TIMELESS	Q9UNS1	1208 aa		5.79	□□□□□ -1.48
MACF1-231	ENST00000564288	PPP4R2	Q9NY27	417 aa		5.78	□□□□□ -1.48
MACF1-231	ENST00000564288	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.77	□□□□□ -1.49
MACF1-231	ENST00000564288	NACAD	O15069	1562 aa		5.76	□□□□□ -1.49
MACF1-231	ENST00000564288	HNRNPUL2	Q1KMD3	747 aa	Known RBP	5.75	□□□□□ -1.49
MACF1-231	ENST00000564288	TRIM44	Q96DX7	344 aa	Predicted RBP	5.75	□□□□□ -1.49
MACF1-231	ENST00000564288	BCAN	Q96GW7	911 aa		5.75	□□□□□ -1.49
MACF1-231	ENST00000564288	FANCI	Q9NVI1	1328 aa		5.74	□□□□□ -1.49
MACF1-231	ENST00000564288	HSP90AA1	P07900	732 aa	Known RBP	5.74	□□□□□ -1.49
MACF1-231	ENST00000564288	NOP58	Q9Y2X3	529 aa	Known RBP	5.73	□□□□□ -1.49
MACF1-231	ENST00000564288	PRKCSH	P14314	528 aa	Predicted RBP	5.72	□□□□□ -1.49
MACF1-231	ENST00000564288	ZNF326	Q5BKZ1	582 aa	Known RBP	5.72	□□□□□ -1.49
MACF1-231	ENST00000564288	NBR1	Q14596	966 aa		5.71	□□□□□ -1.5
MACF1-231	ENST00000564288	PTMS	P20962	102 aa		5.71	□□□□□ -1.5
MACF1-231	ENST00000564288	CCER2	I3L3R5	266 aa		5.7	□□□□□ -1.5
MACF1-231	ENST00000564288	CCDC136	Q96JN2	1154 aa		5.69	□□□□□ -1.5
MACF1-231	ENST00000564288	UBE2Q2	Q8WVN8	375 aa		5.69	□□□□□ -1.5
MACF1-231	ENST00000564288	L1TD1	Q5T7N2	865 aa	Known RBP	5.69	□□□□□ -1.5
MACF1-231	ENST00000564288	BAZ1B	Q9UIG0	1483 aa	Known RBP	5.68	□□□□□ -1.5
MACF1-231	ENST00000564288	NEFM	P07197	916 aa		5.68	□□□□□ -1.5
MACF1-231	ENST00000564288	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.68	□□□□□ -1.5
MACF1-231	ENST00000564288	GOLGA3	Q08378	1498 aa		5.68	□□□□□ -1.5
MACF1-231	ENST00000564288	IPO9	Q96P70	1041 aa	Known RBP	5.67	□□□□□ -1.5
MACF1-231	ENST00000564288	UPF2	Q9HAU5	1272 aa	Known RBP	5.67	□□□□□ -1.5
MACF1-231	ENST00000564288	BECN1	Q14457	450 aa		5.67	□□□□□ -1.5
MACF1-231	ENST00000564288	DDX10	Q13206	875 aa	Known RBP	5.67	□□□□□ -1.5
MACF1-231	ENST00000564288	RB1CC1	Q8TDY2	1594 aa		5.66	□□□□□ -1.5
MACF1-231	ENST00000564288	WRN	Q14191	1432 aa	Predicted RBP eCLIP	5.66	□□□□□ -1.5
MACF1-231	ENST00000564288	ABCC9	O60706	1549 aa		5.65	□□□□□ -1.5
MACF1-231	ENST00000564288	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	5.65	□□□□□ -1.51
MACF1-231	ENST00000564288	TCERG1	O14776	1098 aa	Known RBP	5.64	□□□□□ -1.51
MACF1-231	ENST00000564288	PNN	Q9H307	717 aa	Known RBP	5.64	□□□□□ -1.51
MACF1-231	ENST00000564288	ITGAE	P38570	1179 aa		5.64	□□□□□ -1.51
MACF1-231	ENST00000564288	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
MACF1-231	ENST00000564288	MAP7D2	Q96T17	732 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms