RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
MACF1-232ENST00000567887 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
MACF1-232ENST00000567887 MYT1Q01538 1121 aa9.76□□□□□ -0.85
MACF1-232ENST00000567887 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
MACF1-232ENST00000567887 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
MACF1-232ENST00000567887 CCER1Q8TC90 406 aaPredicted RBP9.53□□□□□ -0.88
MACF1-232ENST00000567887 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
MACF1-232ENST00000567887 TTBK1Q5TCY1 1321 aaPredicted RBP9.21□□□□□ -0.94
MACF1-232ENST00000567887 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
MACF1-232ENST00000567887 APLP2Q06481 763 aa9.18□□□□□ -0.94
MACF1-232ENST00000567887 PCGF6Q9BYE7 350 aa9.18□□□□□ -0.94
MACF1-232ENST00000567887 YTHDC1Q96MU7 727 aaKnown RBP9.16□□□□□ -0.94
MACF1-232ENST00000567887 CENPBP07199 599 aaPredicted RBP9.15□□□□□ -0.94
MACF1-232ENST00000567887 NEFLP07196 543 aa9.12□□□□□ -0.95
MACF1-232ENST00000567887 FAM9AQ8IZU1 332 aaPredicted RBP9.07□□□□□ -0.96
MACF1-232ENST00000567887 RANGAP1P46060 587 aaPredicted RBP9.02□□□□□ -0.96
MACF1-232ENST00000567887 ATP1B4Q9UN42 357 aaPredicted RBP9.01□□□□□ -0.97
MACF1-232ENST00000567887 CNGB1Q14028 1251 aaPredicted RBP8.96□□□□□ -0.97
MACF1-232ENST00000567887 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
MACF1-232ENST00000567887 CLSPNQ9HAW4 1339 aa8.91□□□□□ -0.98
MACF1-232ENST00000567887 POLR3GLQ9BT43 218 aa8.88□□□□□ -0.99
MACF1-232ENST00000567887 RTL5Q5HYW3 569 aaPredicted RBP8.85□□□□□ -0.99
MACF1-232ENST00000567887 EIF5BO60841 1220 aaKnown RBP8.84□□□□□ -0.99
MACF1-232ENST00000567887 BCL11AQ9H165 835 aa8.83□□□□□ -1
MACF1-232ENST00000567887 CHIC1Q5VXU3 224 aa8.83□□□□□ -1
MACF1-232ENST00000567887 SLC4A1APQ9BWU0 796 aaKnown RBP8.8□□□□□ -1
MACF1-232ENST00000567887 ZEB1P37275 1124 aaPredicted RBP8.74□□□□□ -1.01
MACF1-232ENST00000567887 MYT1LQ9UL68 1186 aa8.71□□□□□ -1.01
MACF1-232ENST00000567887 PPARGC1BQ86YN6 1023 aaKnown RBP8.7□□□□□ -1.02
MACF1-232ENST00000567887 SLC24A1O60721 1099 aa8.65□□□□□ -1.03
MACF1-232ENST00000567887 ZBTB47Q9UFB7 747 aaPredicted RBP8.59□□□□□ -1.03
MACF1-232ENST00000567887 BCANQ96GW7 911 aa8.58□□□□□ -1.04
MACF1-232ENST00000567887 GLIPR1L2Q4G1C9 344 aa8.57□□□□□ -1.04
MACF1-232ENST00000567887 ITGAEP38570 1179 aa8.55□□□□□ -1.04
MACF1-232ENST00000567887 CDK11AQ9UQ88 783 aaPredicted RBP8.53□□□□□ -1.04
MACF1-232ENST00000567887 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
MACF1-232ENST00000567887 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
MACF1-232ENST00000567887 ANP32BQ92688 251 aaKnown RBP8.5□□□□□ -1.05
MACF1-232ENST00000567887 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
MACF1-232ENST00000567887 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.06
MACF1-232ENST00000567887 NPM2Q86SE8 214 aaKnown RBP8.45□□□□□ -1.06
MACF1-232ENST00000567887 HRCP23327 699 aa8.45□□□□□ -1.06
MACF1-232ENST00000567887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.44□□□□□ -1.06
MACF1-232ENST00000567887 HNRNPUL2Q1KMD3 747 aaKnown RBP8.44□□□□□ -1.06
MACF1-232ENST00000567887 ARXQ96QS3 562 aa8.42□□□□□ -1.06
MACF1-232ENST00000567887 AMER1Q5JTC6 1135 aaPredicted RBP8.42□□□□□ -1.06
MACF1-232ENST00000567887 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
MACF1-232ENST00000567887 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
MACF1-232ENST00000567887 TNNT2P45379 298 aaPredicted RBP8.35□□□□□ -1.07
MACF1-232ENST00000567887 NBR1Q14596 966 aa8.34□□□□□ -1.07
MACF1-232ENST00000567887 GTF3C3Q9Y5Q9 886 aa8.33□□□□□ -1.08
MACF1-232ENST00000567887 TRIM41Q8WV44 630 aa8.32□□□□□ -1.08
MACF1-232ENST00000567887 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
MACF1-232ENST00000567887 NCBP3Q53F19 620 aaKnown RBP8.31□□□□□ -1.08
MACF1-232ENST00000567887 ANP32AP39687 249 aaKnown RBP8.3□□□□□ -1.08
MACF1-232ENST00000567887 DIEXFQ68CQ4 756 aaKnown RBP8.29□□□□□ -1.08
MACF1-232ENST00000567887 TPRNQ4KMQ1 711 aa8.27□□□□□ -1.09
MACF1-232ENST00000567887 TRIM52Q96A61 297 aa8.22□□□□□ -1.09
MACF1-232ENST00000567887 ZNF326Q5BKZ1 582 aaKnown RBP8.21□□□□□ -1.1
MACF1-232ENST00000567887 NEFMP07197 916 aa8.2□□□□□ -1.1
MACF1-232ENST00000567887 TRIM26Q12899 539 aaPredicted RBP8.2□□□□□ -1.1
MACF1-232ENST00000567887 NCLP19338 710 aaKnown RBP8.19□□□□□ -1.1
MACF1-232ENST00000567887 ANP32CO43423 234 aa8.17□□□□□ -1.1
MACF1-232ENST00000567887 TRIM44Q96DX7 344 aaPredicted RBP8.16□□□□□ -1.1
MACF1-232ENST00000567887 DNTTIP2Q5QJE6 756 aaKnown RBP8.15□□□□□ -1.1
MACF1-232ENST00000567887 UPF2Q9HAU5 1272 aaKnown RBP8.15□□□□□ -1.1
MACF1-232ENST00000567887 RTN4Q9NQC3 1192 aaKnown RBP8.14□□□□□ -1.11
MACF1-232ENST00000567887 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
MACF1-232ENST00000567887 PTMAP06454 111 aaKnown RBP8.13□□□□□ -1.11
MACF1-232ENST00000567887 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
MACF1-232ENST00000567887 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
MACF1-232ENST00000567887 PRM3Q9NNZ6 103 aa8.11□□□□□ -1.11
MACF1-232ENST00000567887 PLPPR3Q6T4P5 718 aa8.11□□□□□ -1.11
MACF1-232ENST00000567887 LOC105371045A0A1W2PR82 267 aa8.1□□□□□ -1.11
MACF1-232ENST00000567887 FKBP8Q14318 412 aa8.1□□□□□ -1.11
MACF1-232ENST00000567887 A0A0G2JS52 829 aa8.09□□□□□ -1.11
MACF1-232ENST00000567887 FAM50AQ14320 339 aaKnown RBP8.08□□□□□ -1.12
MACF1-232ENST00000567887 PLEKHG5O94827 1062 aa8.07□□□□□ -1.12
MACF1-232ENST00000567887 PLCB2Q00722 1185 aa8.06□□□□□ -1.12
MACF1-232ENST00000567887 TNNT3P45378 269 aaPredicted RBP8.05□□□□□ -1.12
MACF1-232ENST00000567887 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
MACF1-232ENST00000567887 ANO8Q9HCE9 1232 aaPredicted RBP8.04□□□□□ -1.12
MACF1-232ENST00000567887 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.12
MACF1-232ENST00000567887 ARID4BQ4LE39 1312 aaPredicted RBP8.02□□□□□ -1.13
MACF1-232ENST00000567887 PDE4CQ08493 712 aa7.98□□□□□ -1.13
MACF1-232ENST00000567887 CLSTN1O94985 981 aa7.98□□□□□ -1.13
MACF1-232ENST00000567887 ERICH6BQ5W0A0 696 aa7.97□□□□□ -1.13
MACF1-232ENST00000567887 CCDC136Q96JN2 1154 aa7.97□□□□□ -1.13
MACF1-232ENST00000567887 DRC7Q8IY82 874 aa7.96□□□□□ -1.14
MACF1-232ENST00000567887 NOC3LQ8WTT2 800 aaKnown RBP7.96□□□□□ -1.14
MACF1-232ENST00000567887 SCAF1Q9H7N4 1312 aaKnown RBP7.96□□□□□ -1.14
MACF1-232ENST00000567887 CALRP27797 417 aaKnown RBP7.95□□□□□ -1.14
MACF1-232ENST00000567887 ARID3AQ99856 593 aa7.95□□□□□ -1.14
MACF1-232ENST00000567887 FAM9BQ8IZU0 186 aa7.94□□□□□ -1.14
MACF1-232ENST00000567887 ANP32EQ9BTT0 268 aa7.94□□□□□ -1.14
MACF1-232ENST00000567887 IRX6P78412 446 aaPredicted RBP7.94□□□□□ -1.14
MACF1-232ENST00000567887 FBXO3Q9UK99 471 aa7.93□□□□□ -1.14
MACF1-232ENST00000567887 ACIN1Q9UKV3 1341 aaKnown RBP7.93□□□□□ -1.14
MACF1-232ENST00000567887 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.93□□□□□ -1.14
MACF1-232ENST00000567887 GOLGA6L22H0YM25 854 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms