RNA–Protein interactions for RNA: ENST00000436959.7

KNTC1-204, Transcript of kinetochore associated 1, humanhuman

TSL 2 BASIC

Gene KNTC1, Length 2,412 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-204ENST00000436959 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
KNTC1-204ENST00000436959 CHIC1Q5VXU3 224 aa13.68□□□□□ -0.22
KNTC1-204ENST00000436959 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
KNTC1-204ENST00000436959 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
KNTC1-204ENST00000436959 FOXD1Q16676 465 aa11.41□□□□□ -0.58
KNTC1-204ENST00000436959 PLPPR3Q6T4P5 718 aa10.97□□□□□ -0.65
KNTC1-204ENST00000436959 MSH5O43196 834 aa10.72□□□□□ -0.69
KNTC1-204ENST00000436959 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
KNTC1-204ENST00000436959 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
KNTC1-204ENST00000436959 ADRA2BP18089 450 aa10.67□□□□□ -0.7
KNTC1-204ENST00000436959 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
KNTC1-204ENST00000436959 SCAF1Q9H7N4 1312 aaKnown RBP9.84□□□□□ -0.83
KNTC1-204ENST00000436959 MAPK8IP2Q13387 824 aaPredicted RBP9.78□□□□□ -0.84
KNTC1-204ENST00000436959 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
KNTC1-204ENST00000436959 PPP4R3CPQ6ZMV5 832 aa9.61□□□□□ -0.87
KNTC1-204ENST00000436959 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
KNTC1-204ENST00000436959 DCAF8L1A6NGE4 600 aa9.4□□□□□ -0.91
KNTC1-204ENST00000436959 HOXD11P31277 338 aaPredicted RBP9.37□□□□□ -0.91
KNTC1-204ENST00000436959 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
KNTC1-204ENST00000436959 NCBP3Q53F19 620 aaKnown RBP9.3□□□□□ -0.92
KNTC1-204ENST00000436959 CACNB1Q02641 598 aaPredicted RBP9.19□□□□□ -0.94
KNTC1-204ENST00000436959 NPM3O75607 178 aaKnown RBP9.1□□□□□ -0.95
KNTC1-204ENST00000436959 RNF39Q9H2S5 420 aa9.1□□□□□ -0.95
KNTC1-204ENST00000436959 DNAJC5BQ9UF47 199 aa9.05□□□□□ -0.96
KNTC1-204ENST00000436959 C1QBPQ07021 282 aaKnown RBP9.01□□□□□ -0.97
KNTC1-204ENST00000436959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■■□□ 19
KNTC1-204ENST00000436959 KCNA4P22459 653 aa8.95□□□□□ -0.98
KNTC1-204ENST00000436959 U3KPZ7 1027 aaPredicted RBP8.74□□□□□ -1.01
KNTC1-204ENST00000436959 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
KNTC1-204ENST00000436959 CAPN15O75808 1086 aa8.65□□□□□ -1.02
KNTC1-204ENST00000436959 SPINK5Q9NQ38 1064 aaPredicted RBP8.61□□□□□ -1.03
KNTC1-204ENST00000436959 APLP2Q06481 763 aa8.6□□□□□ -1.03
KNTC1-204ENST00000436959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
KNTC1-204ENST00000436959 HNRNPUL2Q1KMD3 747 aaKnown RBP8.58□□□□□ -1.04
KNTC1-204ENST00000436959 DSG3P32926 999 aa8.54□□□□□ -1.04
KNTC1-204ENST00000436959 TRHP20396 242 aaPredicted RBP8.52□□□□□ -1.05
KNTC1-204ENST00000436959 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
KNTC1-204ENST00000436959 ZNF219Q9P2Y4 722 aaPredicted RBP8.5□□□□□ -1.05
KNTC1-204ENST00000436959 SLC4A1APQ9BWU0 796 aaKnown RBP8.49□□□□□ -1.05
KNTC1-204ENST00000436959 MYCNP04198 464 aaPredicted RBP8.44□□□□□ -1.06
KNTC1-204ENST00000436959 ABCB7O75027 752 aa8.43□□□□□ -1.06
KNTC1-204ENST00000436959 FOXD4L1Q9NU39 408 aa8.37□□□□□ -1.07
KNTC1-204ENST00000436959 POLA2Q14181 598 aa8.28□□□□□ -1.08
KNTC1-204ENST00000436959 NISCHQ9Y2I1 1504 aa8.26□□□□□ -1.09
KNTC1-204ENST00000436959 EHMT2Q96KQ7 1210 aa8.22□□□□□ -1.09
KNTC1-204ENST00000436959 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.1
KNTC1-204ENST00000436959 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
KNTC1-204ENST00000436959 ZBTB22O15209 634 aa8.19□□□□□ -1.1
KNTC1-204ENST00000436959 POTEHQ6S545 545 aa8.15□□□□□ -1.1
KNTC1-204ENST00000436959 ZBTB12Q9Y330 459 aaPredicted RBP8.14□□□□□ -1.11
KNTC1-204ENST00000436959 ATXN8OSP0DMR3 200 aa8.11□□□□□ -1.11
KNTC1-204ENST00000436959 CSRNP3Q8WYN3 585 aa8□□□□□ -1.13
KNTC1-204ENST00000436959 AKT1S1Q96B36 256 aa8□□□□□ -1.13
KNTC1-204ENST00000436959 OSCARQ8IYS5 282 aa8□□□□□ -1.13
KNTC1-204ENST00000436959 CHRDL2Q6WN34 429 aa7.98□□□□□ -1.13
KNTC1-204ENST00000436959 FBLN2P98095 1184 aa7.97□□□□□ -1.13
KNTC1-204ENST00000436959 REM2Q8IYK8 340 aaPredicted RBP7.91□□□□□ -1.14
KNTC1-204ENST00000436959 SPDYE2BA6NHP3 402 aa7.87□□□□□ -1.15
KNTC1-204ENST00000436959 SPDYE6P0CI01 402 aa7.87□□□□□ -1.15
KNTC1-204ENST00000436959 SPDYE2Q495Y8 402 aa7.87□□□□□ -1.15
KNTC1-204ENST00000436959 MKRN4PQ13434 485 aaPredicted RBP7.82□□□□□ -1.16
KNTC1-204ENST00000436959 PITPNM1O00562 1244 aa7.81□□□□□ -1.16
KNTC1-204ENST00000436959 ZNF692Q9BU19 519 aaPredicted RBP7.8□□□□□ -1.16
KNTC1-204ENST00000436959 PIP4P2Q8N4L2 257 aa7.78□□□□□ -1.16
KNTC1-204ENST00000436959 FXR2P51116 673 aaKnown RBP eCLIP7.74□□□□□ -1.17
KNTC1-204ENST00000436959 SPDYE1Q8NFV5 336 aaPredicted RBP7.74□□□□□ -1.17
KNTC1-204ENST00000436959 CLEC11AQ9Y240 323 aa7.74□□□□□ -1.17
KNTC1-204ENST00000436959 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
KNTC1-204ENST00000436959 HAX1O00165 279 aa7.69□□□□□ -1.18
KNTC1-204ENST00000436959 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.188e-7■■■■□ 21.2
KNTC1-204ENST00000436959 SP7Q8TDD2 431 aaPredicted RBP7.66□□□□□ -1.18
KNTC1-204ENST00000436959 PRKAR2AP13861 404 aaKnown RBP7.64□□□□□ -1.19
KNTC1-204ENST00000436959 PRR29P0C7W0 189 aa7.61□□□□□ -1.19
KNTC1-204ENST00000436959 CHADLQ6NUI6 762 aa7.54□□□□□ -1.2
KNTC1-204ENST00000436959 SPDYE4A6NLX3 237 aa7.52□□□□□ -1.2
KNTC1-204ENST00000436959 EVX2Q03828 476 aa7.51□□□□□ -1.21
KNTC1-204ENST00000436959 STAG3Q9UJ98 1225 aa7.5□□□□□ -1.21
KNTC1-204ENST00000436959 C19orf67A6NJJ6 358 aa7.49□□□□□ -1.21
KNTC1-204ENST00000436959 FARP1Q9Y4F1 1045 aaPredicted RBP7.44□□□□□ -1.22
KNTC1-204ENST00000436959 CD44P16070 742 aaKnown RBP7.4□□□□□ -1.22
KNTC1-204ENST00000436959 GABBR2O75899 941 aa7.39□□□□□ -1.23
KNTC1-204ENST00000436959 CREBZFQ9NS37 354 aa7.38□□□□□ -1.23
KNTC1-204ENST00000436959 CLCN6P51797 869 aa7.32□□□□□ -1.24
KNTC1-204ENST00000436959 NPM1P06748 294 aaKnown RBP eCLIP7.31□□□□□ -1.24
KNTC1-204ENST00000436959 ZRANB1Q9UGI0 708 aa7.31□□□□□ -1.24
KNTC1-204ENST00000436959 PAK3O75914 559 aaPredicted RBP7.3□□□□□ -1.24
KNTC1-204ENST00000436959 CCDC180Q9P1Z9 1646 aa7.29□□□□□ -1.24
KNTC1-204ENST00000436959 PROM2Q8N271 834 aa7.28□□□□□ -1.24
KNTC1-204ENST00000436959 ZNF579Q8NAF0 562 aaKnown RBP7.27□□□□□ -1.25
KNTC1-204ENST00000436959 FKBP8Q14318 412 aa7.26□□□□□ -1.25
KNTC1-204ENST00000436959 DCBLD2Q96PD2 775 aa7.25□□□□□ -1.25
KNTC1-204ENST00000436959 PLEKHG5O94827 1062 aa7.24□□□□□ -1.25
KNTC1-204ENST00000436959 MNX1P50219 401 aaPredicted RBP7.22□□□□□ -1.25
KNTC1-204ENST00000436959 MIER1Q8N108 512 aa7.21□□□□□ -1.26
KNTC1-204ENST00000436959 LHX8Q68G74 356 aa7.19□□□□□ -1.26
KNTC1-204ENST00000436959 POTEIP0CG38 1075 aa7.19□□□□□ -1.26
KNTC1-204ENST00000436959 PHF12Q96QT6 1004 aa7.18□□□□□ -1.26
KNTC1-204ENST00000436959 GALR2O43603 387 aaPredicted RBP7.17□□□□□ -1.26
KNTC1-204ENST00000436959 PLCD3Q8N3E9 789 aa7.16□□□□□ -1.26
KNTC1-204ENST00000436959 TSPYL2Q9H2G4 693 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms