Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 AC126763.1-201ENST00000552015 2118 ntBASIC16.61■□□□□ 0.25
HLA-DQB1P01920 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 HLA-G-202ENST00000376815 851 ntBASIC16.61■□□□□ 0.25
HLA-DQB1P01920 HLA-G-203ENST00000376818 1127 ntBASIC16.61■□□□□ 0.25
HLA-DQB1P01920 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-DQB1P01920 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 IRX1P1-201ENST00000438849 1838 ntBASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB1P01920 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 AC124067.4-201ENST00000519691 2379 ntBASIC16.59■□□□□ 0.25
HLA-DQB1P01920 GNAS-203ENST00000306120 1878 ntBASIC16.59■□□□□ 0.25
HLA-DQB1P01920 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 KRT19P1-201ENST00000405746 1186 ntBASIC16.59■□□□□ 0.25
HLA-DQB1P01920 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DQB1P01920 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms