Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.15■□□□□ 0.34
CDRT1O95170 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDRT1O95170 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.15■□□□□ 0.34
CDRT1O95170 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CDRT1O95170 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDRT1O95170 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.14■□□□□ 0.33
CDRT1O95170 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.14■□□□□ 0.33
CDRT1O95170 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.14■□□□□ 0.33
CDRT1O95170 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CDRT1O95170 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.14■□□□□ 0.33
CDRT1O95170 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.14■□□□□ 0.33
CDRT1O95170 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.14■□□□□ 0.33
CDRT1O95170 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.14■□□□□ 0.33
CDRT1O95170 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDRT1O95170 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.14■□□□□ 0.33
CDRT1O95170 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CDRT1O95170 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDRT1O95170 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.14■□□□□ 0.33
CDRT1O95170 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 KRT8P20-201ENST00000423953 1409 ntBASIC17.13■□□□□ 0.33
CDRT1O95170 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CDRT1O95170 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.13■□□□□ 0.33
CDRT1O95170 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDRT1O95170 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.13■□□□□ 0.33
CDRT1O95170 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.13■□□□□ 0.33
CDRT1O95170 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.13■□□□□ 0.33
CDRT1O95170 TERF1P5-201ENST00000477545 1207 ntBASIC17.13■□□□□ 0.33
CDRT1O95170 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.13■□□□□ 0.33
CDRT1O95170 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.13■□□□□ 0.33
CDRT1O95170 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.13■□□□□ 0.33
CDRT1O95170 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDRT1O95170 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.13■□□□□ 0.33
CDRT1O95170 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.13■□□□□ 0.33
CDRT1O95170 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDRT1O95170 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.13■□□□□ 0.33
CDRT1O95170 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
CDRT1O95170 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDRT1O95170 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.12■□□□□ 0.33
CDRT1O95170 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDRT1O95170 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDRT1O95170 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.12■□□□□ 0.33
CDRT1O95170 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.12■□□□□ 0.33
CDRT1O95170 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDRT1O95170 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDRT1O95170 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms