Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.16□□□□□ -0.3
NDUFA1O15239 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.16□□□□□ -0.3
NDUFA1O15239 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.16□□□□□ -0.3
NDUFA1O15239 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 AC008694.1-202ENST00000636953 945 ntBASIC13.16□□□□□ -0.3
NDUFA1O15239 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NDUFA1O15239 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 PTBP1P-201ENST00000554374 1601 ntBASIC13.15□□□□□ -0.3
NDUFA1O15239 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 RARRES2P4-201ENST00000514074 484 ntBASIC13.15□□□□□ -0.3
NDUFA1O15239 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.15□□□□□ -0.3
NDUFA1O15239 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 AC069236.1-201ENST00000604339 616 ntBASIC13.15□□□□□ -0.3
NDUFA1O15239 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFA1O15239 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 AL133373.2-201ENST00000623187 2828 ntBASIC13.15□□□□□ -0.3
NDUFA1O15239 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFA1O15239 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFA1O15239 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFA1O15239 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFA1O15239 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
NDUFA1O15239 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFA1O15239 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 KRT8P20-201ENST00000423953 1409 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 AP000997.3-201ENST00000623333 2250 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms