Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 AL390719.1-204ENST00000412397 1219 ntBASIC18.18■□□□□ 0.5
GPC6Q9Y625 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 AC060766.5-201ENST00000590539 871 ntBASIC18.18■□□□□ 0.5
GPC6Q9Y625 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.18■□□□□ 0.5
GPC6Q9Y625 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC6Q9Y625 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC6Q9Y625 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC6Q9Y625 TFP1-202ENST00000475455 1573 ntBASIC18.17■□□□□ 0.5
GPC6Q9Y625 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 AC005829.2-201ENST00000571422 1056 ntBASIC18.16■□□□□ 0.5
GPC6Q9Y625 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 AC092368.3-202ENST00000574180 1591 ntBASIC18.16■□□□□ 0.5
GPC6Q9Y625 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC6Q9Y625 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GPC6Q9Y625 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GPC6Q9Y625 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.15■□□□□ 0.5
GPC6Q9Y625 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC6Q9Y625 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC6Q9Y625 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC6Q9Y625 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC6Q9Y625 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC6Q9Y625 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms