Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 AK4P3-201ENST00000418260 669 ntBASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 AC087388.1-201ENST00000571370 1112 ntBASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 NTF6B-201ENST00000591913 560 ntBASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 AC099778.1-201ENST00000568593 1911 ntBASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 AC007663.1-201ENST00000438948 1240 ntBASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 LINC01238-205ENST00000567549 1107 ntBASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CTDP1Q9Y5B0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CTDP1Q9Y5B0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 CKBP1-201ENST00000565489 1086 ntBASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 AL512604.3-201ENST00000569583 964 ntBASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 AC006011.2-201ENST00000621313 1158 ntBASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CTDP1Q9Y5B0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms