Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGB4Q9UN71 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PCDHGB4Q9UN71 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB4Q9UN71 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 AF201337.1-201ENST00000520239 748 ntBASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB4Q9UN71 CROCCP3-202ENST00000420820 1947 ntBASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 AC105036.2-201ENST00000569468 176 ntBASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 HTR7P1-202ENST00000624664 4411 ntBASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 AP000997.3-201ENST00000623333 2250 ntBASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms