Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX18Q96RF0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX18Q96RF0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX18Q96RF0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX18Q96RF0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 AL133373.2-201ENST00000623187 2828 ntBASIC17.5■□□□□ 0.39
SNX18Q96RF0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.5■□□□□ 0.39
SNX18Q96RF0 FAM201B-201ENST00000458407 597 ntBASIC17.5■□□□□ 0.39
SNX18Q96RF0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 AC092118.2-201ENST00000613495 667 ntBASIC17.5■□□□□ 0.39
SNX18Q96RF0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX18Q96RF0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX18Q96RF0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 TFP1-202ENST00000475455 1573 ntBASIC17.49■□□□□ 0.39
SNX18Q96RF0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 RNA5SP413-201ENST00000516373 109 ntBASIC17.49■□□□□ 0.39
SNX18Q96RF0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX18Q96RF0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNX18Q96RF0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX18Q96RF0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SNX18Q96RF0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms