Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 BX119927.1-201ENST00000636596 1552 ntBASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.2■□□□□ 0.99
RPGRIP1Q96KN7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.2■□□□□ 0.99
RPGRIP1Q96KN7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 KRT18P57-201ENST00000443599 1254 ntBASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRIP1Q96KN7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRIP1Q96KN7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 AC093503.3-201ENST00000624917 2352 ntBASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 PGM5P4-201ENST00000421970 445 ntBASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 KRT8P9-201ENST00000558927 1449 ntBASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.18■□□□□ 0.98
RPGRIP1Q96KN7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.17■□□□□ 0.98
RPGRIP1Q96KN7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms