Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PRMT1-206ENST00000526224 578 ntTSL 310.5□□□□□ -0.731e-11■■□□□ 13.3
SND1Q7KZF4 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.741e-9■■□□□ 13.3
SND1Q7KZF4 ATP5G1-207ENST00000513347 2214 ntTSL 210.41□□□□□ -0.741e-11■■□□□ 13.3
SND1Q7KZF4 CD3D-204ENST00000529594 422 ntTSL 1 (best) BASIC10.41□□□□□ -0.742e-6■■□□□ 13.3
SND1Q7KZF4 ATP5G1-202ENST00000393366 614 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.751e-11■■□□□ 13.3
SND1Q7KZF4 ATP5G1-203ENST00000502964 679 ntTSL 210.19□□□□□ -0.781e-11■■□□□ 13.3
SND1Q7KZF4 SPCS1-203ENST00000448693 826 ntTSL 210.17□□□□□ -0.782e-8■■□□□ 13.3
SND1Q7KZF4 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC9.64□□□□□ -0.871e-9■■□□□ 13.3
SND1Q7KZF4 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC9.54□□□□□ -0.881e-9■■□□□ 13.3
SND1Q7KZF4 TGFBR3-206ENST00000470600 574 ntTSL 28.87□□□□□ -0.993e-7■■□□□ 13.3
SND1Q7KZF4 RNF167-210ENST00000574548 440 ntTSL 28.54□□□□□ -1.042e-6■■□□□ 13.3
SND1Q7KZF4 SYS1-208ENST00000479779 1022 ntTSL 27.93□□□□□ -1.142e-6■■□□□ 13.3
SND1Q7KZF4 MANBA-203ENST00000506478 692 ntTSL 57.74□□□□□ -1.172e-7■■□□□ 13.3
SND1Q7KZF4 CNPY2-203ENST00000546466 673 ntTSL 36.37□□□□□ -1.393e-7■■□□□ 13.3
SND1Q7KZF4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.36□□□□□ -1.392e-6■■□□□ 13.3
SND1Q7KZF4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.35□□□□□ -1.392e-6■■□□□ 13.3
SND1Q7KZF4 RPA3-207ENST00000483031 641 ntTSL 26.13□□□□□ -1.432e-6■■□□□ 13.3
SND1Q7KZF4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.78□□□□□ -1.482e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-208ENST00000412351 491 ntTSL 35.59□□□□□ -1.512e-6■■□□□ 13.3
SND1Q7KZF4 XPO5-210ENST00000496341 800 ntTSL 54.97□□□□□ -1.612e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-204ENST00000403098 326 ntTSL 54.78□□□□□ -1.642e-6■■□□□ 13.3
SND1Q7KZF4 CD3D-205ENST00000534687 483 ntTSL 24.64□□□□□ -1.672e-6■■□□□ 13.3
SND1Q7KZF4 CD3D-203ENST00000526561 257 ntTSL 23.79□□□□□ -1.82e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-224ENST00000532115 328 ntTSL 33.62□□□□□ -1.832e-6■■□□□ 13.3
SND1Q7KZF4 CP-208ENST00000474204 712 ntTSL 210.87□□□□□ -0.672e-10■■□□□ 13.2
SND1Q7KZF4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.078e-9■■□□□ 13.2
SND1Q7KZF4 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.098e-9■■□□□ 13.2
SND1Q7KZF4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.188e-9■■□□□ 13.2
SND1Q7KZF4 TMEM123-205ENST00000528969 568 ntAPPRIS ALT2 TSL 45.88□□□□□ -1.478e-9■■□□□ 13.2
SND1Q7KZF4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.772e-19■■□□□ 13.2
SND1Q7KZF4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.22e-19■■□□□ 13.2
SND1Q7KZF4 UBB-207ENST00000578649 477 ntTSL 513.22□□□□□ -0.292e-19■■□□□ 13.2
SND1Q7KZF4 UBB-209ENST00000614404 1056 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.582e-19■■□□□ 13.2
SND1Q7KZF4 UBB-204ENST00000535788 704 ntTSL 2 BASIC11.24□□□□□ -0.612e-19■■□□□ 13.2
SND1Q7KZF4 UBB-205ENST00000577640 724 ntTSL 510.79□□□□□ -0.682e-19■■□□□ 13.2
SND1Q7KZF4 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.792e-19■■□□□ 13.2
SND1Q7KZF4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.337e-10■■□□□ 13.2
SND1Q7KZF4 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC12.99□□□□□ -0.337e-10■■□□□ 13.2
SND1Q7KZF4 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.25□□□□□ -0.457e-10■■□□□ 13.2
SND1Q7KZF4 GRN-211ENST00000588143 546 ntTSL 315.49■□□□□ 0.075e-14■■□□□ 13.2
SND1Q7KZF4 C5-203ENST00000466280 540 ntTSL 56.55□□□□□ -1.364e-12■■□□□ 13.2
SND1Q7KZF4 COPB1-211ENST00000534234 1584 ntTSL 59.17□□□□□ -0.941e-6■■□□□ 13.2
SND1Q7KZF4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.03■□□□□ 0.168e-9■■□□□ 13.2
SND1Q7KZF4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.82■□□□□ 0.445e-6■■□□□ 13.2
SND1Q7KZF4 CCT8-209ENST00000494296 514 ntTSL 313.03□□□□□ -0.323e-26■■□□□ 13.2
SND1Q7KZF4 WARS-216ENST00000554601 719 ntTSL 29.05□□□□□ -0.961e-10■■□□□ 13.2
SND1Q7KZF4 ZNF800-207ENST00000485577 1478 ntTSL 524.59■■□□□ 1.539e-9■■□□□ 13.2
SND1Q7KZF4 AC000123.3-201ENST00000624029 4975 ntBASIC5.24□□□□□ -1.579e-9■■□□□ 13.2
SND1Q7KZF4 ABCC1-208ENST00000576557 542 ntTSL 412.66□□□□□ -0.384e-7■■□□□ 13.2
SND1Q7KZF4 DDB1-216ENST00000539739 1624 ntTSL 516.08■□□□□ 0.162e-6■■□□□ 13.2
SND1Q7KZF4 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.86□□□□□ -0.035e-6■■□□□ 13.2
SND1Q7KZF4 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC10.69□□□□□ -0.75e-6■■□□□ 13.2
SND1Q7KZF4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.537e-7■■□□□ 13.2
SND1Q7KZF4 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.277e-7■■□□□ 13.2
SND1Q7KZF4 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.31■□□□□ 0.846e-8■■□□□ 13.2
SND1Q7KZF4 CERS2-203ENST00000361419 997 ntTSL 231.09■■■□□ 2.571e-7■■□□□ 13.2
SND1Q7KZF4 CERS2-210ENST00000558062 896 ntTSL 216.36■□□□□ 0.211e-7■■□□□ 13.2
SND1Q7KZF4 CERS2-212ENST00000559660 242 ntTSL 52.05□□□□□ -2.081e-7■■□□□ 13.2
SND1Q7KZF4 SC5D-204ENST00000527183 1524 ntTSL 27.41□□□□□ -1.222e-6■■□□□ 13.2
SND1Q7KZF4 CANX-203ENST00000502296 825 ntTSL 416.02■□□□□ 0.164e-15■■□□□ 13.1
SND1Q7KZF4 TCIRG1-203ENST00000524870 830 ntTSL 1 (best)22.09■■□□□ 1.132e-12■■□□□ 13.1
SND1Q7KZF4 SND1-202ENST00000461056 555 ntTSL 48.41□□□□□ -1.063e-12■■□□□ 13.1
SND1Q7KZF4 SND1-207ENST00000468621 494 ntTSL 46.08□□□□□ -1.443e-12■■□□□ 13.1
SND1Q7KZF4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.11■□□□□ 0.652e-12■■□□□ 13.1
SND1Q7KZF4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.522e-12■■□□□ 13.1
SND1Q7KZF4 PBK-204ENST00000524266 819 ntTSL 58.18□□□□□ -1.12e-12■■□□□ 13.1
SND1Q7KZF4 PBK-202ENST00000521226 748 ntTSL 37.55□□□□□ -1.22e-12■■□□□ 13.1
SND1Q7KZF4 ACSM3-208ENST00000563914 771 ntTSL 57.51□□□□□ -1.215e-7■■□□□ 13.1
SND1Q7KZF4 FKBP10-203ENST00000455106 1965 ntTSL 215.6■□□□□ 0.097e-12■■□□□ 13.1
SND1Q7KZF4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.01■■□□□ 1.751e-7■■□□□ 13.1
SND1Q7KZF4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.24■■□□□ 1.471e-7■■□□□ 13.1
SND1Q7KZF4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.441e-7■■□□□ 13.1
SND1Q7KZF4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.95■□□□□ 0.461e-7■■□□□ 13.1
SND1Q7KZF4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.391e-7■■□□□ 13.1
SND1Q7KZF4 AQP1-205ENST00000482461 560 ntTSL 413.04□□□□□ -0.321e-7■■□□□ 13.1
SND1Q7KZF4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.692e-17■■□□□ 13.1
SND1Q7KZF4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.673e-6■■□□□ 13.1
SND1Q7KZF4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.283e-6■■□□□ 13.1
SND1Q7KZF4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-6■■□□□ 13.1
SND1Q7KZF4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.223e-6■■□□□ 13.1
SND1Q7KZF4 SLC26A11-215ENST00000575019 492 ntTSL 316.2■□□□□ 0.183e-6■■□□□ 13.1
SND1Q7KZF4 CSNK2A2-203ENST00000563307 4978 ntTSL 314.14□□□□□ -0.152e-17■■□□□ 13.1
SND1Q7KZF4 TM2D3-208ENST00000559891 2133 ntTSL 1 (best)12.11□□□□□ -0.474e-9■■□□□ 13.1
SND1Q7KZF4 CSNK2A2-206ENST00000567730 947 ntTSL 311.88□□□□□ -0.512e-17■■□□□ 13.1
SND1Q7KZF4 CSNK2A2-205ENST00000566813 1569 ntTSL 59.07□□□□□ -0.962e-17■■□□□ 13.1
SND1Q7KZF4 GRN-208ENST00000587387 614 ntTSL 415.4■□□□□ 0.064e-14■■□□□ 13.1
SND1Q7KZF4 CFB-275ENST00000465750 568 ntTSL 27.42□□□□□ -1.222e-16■■□□□ 13.1
SND1Q7KZF4 ARL6IP1-208ENST00000569976 778 ntTSL 215.09■□□□□ 0.015e-14■■□□□ 13.1
SND1Q7KZF4 VMP1-211ENST00000591315 800 ntTSL 311.89□□□□□ -0.518e-10■■□□□ 13.1
SND1Q7KZF4 FECH-203ENST00000585494 1874 ntTSL 222.09■■□□□ 1.135e-6■■□□□ 13.1
SND1Q7KZF4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.995e-6■■□□□ 13.1
SND1Q7KZF4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.985e-6■■□□□ 13.1
SND1Q7KZF4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.95e-6■■□□□ 13.1
SND1Q7KZF4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.87■□□□□ 0.615e-6■■□□□ 13.1
SND1Q7KZF4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.51■□□□□ 0.555e-6■■□□□ 13.1
SND1Q7KZF4 DNAJC1-204ENST00000476103 682 ntTSL 218.39■□□□□ 0.535e-6■■□□□ 13.1
SND1Q7KZF4 FECH-210ENST00000592699 1049 ntTSL 318.32■□□□□ 0.525e-6■■□□□ 13.1
SND1Q7KZF4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.45e-6■■□□□ 13.1
SND1Q7KZF4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.35e-6■■□□□ 13.1
SND1Q7KZF4 DNAJC1-203ENST00000447548 363 ntTSL 516.85■□□□□ 0.295e-6■■□□□ 13.1
Retrieved 100 of 13,567 protein–RNA pairs in 123.4 ms