RNA–Protein interactions for RNA: ENST00000563914.1

ACSM3-208, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 5

Gene ACSM3, Length 771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-208ENST00000563914 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
ACSM3-208ENST00000563914 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
ACSM3-208ENST00000563914 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
ACSM3-208ENST00000563914 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
ACSM3-208ENST00000563914 FOXD1Q16676 465 aa17.68■□□□□ 0.42
ACSM3-208ENST00000563914 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
ACSM3-208ENST00000563914 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
ACSM3-208ENST00000563914 ADRA2BP18089 450 aa16.85■□□□□ 0.29
ACSM3-208ENST00000563914 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
ACSM3-208ENST00000563914 MSH5O43196 834 aa16.36■□□□□ 0.21
ACSM3-208ENST00000563914 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
ACSM3-208ENST00000563914 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
ACSM3-208ENST00000563914 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
ACSM3-208ENST00000563914 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
ACSM3-208ENST00000563914 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
ACSM3-208ENST00000563914 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
ACSM3-208ENST00000563914 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
ACSM3-208ENST00000563914 KCNA4P22459 653 aa14.78□□□□□ -0.04
ACSM3-208ENST00000563914 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
ACSM3-208ENST00000563914 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
ACSM3-208ENST00000563914 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
ACSM3-208ENST00000563914 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
ACSM3-208ENST00000563914 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
ACSM3-208ENST00000563914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACSM3-208ENST00000563914 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
ACSM3-208ENST00000563914 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
ACSM3-208ENST00000563914 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
ACSM3-208ENST00000563914 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
ACSM3-208ENST00000563914 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
ACSM3-208ENST00000563914 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
ACSM3-208ENST00000563914 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
ACSM3-208ENST00000563914 ZBTB22O15209 634 aa13.58□□□□□ -0.24
ACSM3-208ENST00000563914 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
ACSM3-208ENST00000563914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
ACSM3-208ENST00000563914 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
ACSM3-208ENST00000563914 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
ACSM3-208ENST00000563914 CAPN15O75808 1086 aa13.48□□□□□ -0.25
ACSM3-208ENST00000563914 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
ACSM3-208ENST00000563914 APLP2Q06481 763 aa13.44□□□□□ -0.26
ACSM3-208ENST00000563914 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
ACSM3-208ENST00000563914 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
ACSM3-208ENST00000563914 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
ACSM3-208ENST00000563914 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
ACSM3-208ENST00000563914 DSG3P32926 999 aa13.26□□□□□ -0.29
ACSM3-208ENST00000563914 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
ACSM3-208ENST00000563914 ABCB7O75027 752 aa13.21□□□□□ -0.29
ACSM3-208ENST00000563914 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
ACSM3-208ENST00000563914 POLA2Q14181 598 aa13.09□□□□□ -0.31
ACSM3-208ENST00000563914 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
ACSM3-208ENST00000563914 FBLN2P98095 1184 aa12.7□□□□□ -0.38
ACSM3-208ENST00000563914 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
ACSM3-208ENST00000563914 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
ACSM3-208ENST00000563914 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
ACSM3-208ENST00000563914 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
ACSM3-208ENST00000563914 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
ACSM3-208ENST00000563914 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
ACSM3-208ENST00000563914 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
ACSM3-208ENST00000563914 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
ACSM3-208ENST00000563914 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
ACSM3-208ENST00000563914 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
ACSM3-208ENST00000563914 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
ACSM3-208ENST00000563914 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
ACSM3-208ENST00000563914 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
ACSM3-208ENST00000563914 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
ACSM3-208ENST00000563914 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
ACSM3-208ENST00000563914 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
ACSM3-208ENST00000563914 POTEHQ6S545 545 aa12.09□□□□□ -0.47
ACSM3-208ENST00000563914 FKBP8Q14318 412 aa12.08□□□□□ -0.48
ACSM3-208ENST00000563914 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
ACSM3-208ENST00000563914 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
ACSM3-208ENST00000563914 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■□□□□ 9.9
ACSM3-208ENST00000563914 PROM2Q8N271 834 aa11.96□□□□□ -0.49
ACSM3-208ENST00000563914 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
ACSM3-208ENST00000563914 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
ACSM3-208ENST00000563914 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
ACSM3-208ENST00000563914 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
ACSM3-208ENST00000563914 HAX1O00165 279 aa11.73□□□□□ -0.53
ACSM3-208ENST00000563914 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
ACSM3-208ENST00000563914 MIER1Q8N108 512 aa11.69□□□□□ -0.54
ACSM3-208ENST00000563914 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
ACSM3-208ENST00000563914 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
ACSM3-208ENST00000563914 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
ACSM3-208ENST00000563914 NISCHQ9Y2I1 1504 aa11.61□□□□□ -0.55
ACSM3-208ENST00000563914 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
ACSM3-208ENST00000563914 EVX2Q03828 476 aa11.6□□□□□ -0.55
ACSM3-208ENST00000563914 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
ACSM3-208ENST00000563914 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
ACSM3-208ENST00000563914 CD44P16070 742 aaKnown RBP11.54□□□□□ -0.56
ACSM3-208ENST00000563914 VASPP50552 380 aaPredicted RBP11.53□□□□□ -0.56
ACSM3-208ENST00000563914 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
ACSM3-208ENST00000563914 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
ACSM3-208ENST00000563914 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
ACSM3-208ENST00000563914 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
ACSM3-208ENST00000563914 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
ACSM3-208ENST00000563914 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
ACSM3-208ENST00000563914 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
ACSM3-208ENST00000563914 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
ACSM3-208ENST00000563914 NUBP1P53384 320 aa11.36□□□□□ -0.59
ACSM3-208ENST00000563914 GABBR2O75899 941 aa11.35□□□□□ -0.59
ACSM3-208ENST00000563914 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms