RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
RPA3-203ENST00000401447 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
RPA3-203ENST00000401447 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
RPA3-203ENST00000401447 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
RPA3-203ENST00000401447 FOXD1Q16676 465 aa16.33■□□□□ 0.2
RPA3-203ENST00000401447 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
RPA3-203ENST00000401447 MSH5O43196 834 aa15.27■□□□□ 0.04
RPA3-203ENST00000401447 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
RPA3-203ENST00000401447 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
RPA3-203ENST00000401447 ADRA2BP18089 450 aa15.17■□□□□ 0.02
RPA3-203ENST00000401447 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
RPA3-203ENST00000401447 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
RPA3-203ENST00000401447 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
RPA3-203ENST00000401447 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
RPA3-203ENST00000401447 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
RPA3-203ENST00000401447 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
RPA3-203ENST00000401447 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
RPA3-203ENST00000401447 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
RPA3-203ENST00000401447 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
RPA3-203ENST00000401447 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
RPA3-203ENST00000401447 KCNA4P22459 653 aa13.09□□□□□ -0.31
RPA3-203ENST00000401447 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
RPA3-203ENST00000401447 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
RPA3-203ENST00000401447 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
RPA3-203ENST00000401447 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
RPA3-203ENST00000401447 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
RPA3-203ENST00000401447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.383e-7■■■■■ 34
RPA3-203ENST00000401447 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
RPA3-203ENST00000401447 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
RPA3-203ENST00000401447 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
RPA3-203ENST00000401447 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
RPA3-203ENST00000401447 DSG3P32926 999 aa12.22□□□□□ -0.45
RPA3-203ENST00000401447 CAPN15O75808 1086 aa12.2□□□□□ -0.46
RPA3-203ENST00000401447 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
RPA3-203ENST00000401447 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
RPA3-203ENST00000401447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
RPA3-203ENST00000401447 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
RPA3-203ENST00000401447 APLP2Q06481 763 aa12.05□□□□□ -0.48
RPA3-203ENST00000401447 ZBTB22O15209 634 aa12.01□□□□□ -0.49
RPA3-203ENST00000401447 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
RPA3-203ENST00000401447 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
RPA3-203ENST00000401447 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
RPA3-203ENST00000401447 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
RPA3-203ENST00000401447 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
RPA3-203ENST00000401447 ABCB7O75027 752 aa11.92□□□□□ -0.5
RPA3-203ENST00000401447 POLA2Q14181 598 aa11.72□□□□□ -0.53
RPA3-203ENST00000401447 POTEHQ6S545 545 aa11.72□□□□□ -0.53
RPA3-203ENST00000401447 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
RPA3-203ENST00000401447 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
RPA3-203ENST00000401447 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
RPA3-203ENST00000401447 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
RPA3-203ENST00000401447 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
RPA3-203ENST00000401447 AKT1S1Q96B36 256 aa11.36□□□□□ -0.59
RPA3-203ENST00000401447 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
RPA3-203ENST00000401447 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
RPA3-203ENST00000401447 FBLN2P98095 1184 aa11.18□□□□□ -0.62
RPA3-203ENST00000401447 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
RPA3-203ENST00000401447 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
RPA3-203ENST00000401447 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
RPA3-203ENST00000401447 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
RPA3-203ENST00000401447 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
RPA3-203ENST00000401447 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
RPA3-203ENST00000401447 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPA3-203ENST00000401447 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
RPA3-203ENST00000401447 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
RPA3-203ENST00000401447 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
RPA3-203ENST00000401447 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
RPA3-203ENST00000401447 HAX1O00165 279 aa10.88□□□□□ -0.67
RPA3-203ENST00000401447 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
RPA3-203ENST00000401447 FKBP8Q14318 412 aa10.86□□□□□ -0.67
RPA3-203ENST00000401447 CLEC11AQ9Y240 323 aa10.86□□□□□ -0.67
RPA3-203ENST00000401447 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
RPA3-203ENST00000401447 EVX2Q03828 476 aa10.81□□□□□ -0.68
RPA3-203ENST00000401447 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
RPA3-203ENST00000401447 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
RPA3-203ENST00000401447 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
RPA3-203ENST00000401447 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
RPA3-203ENST00000401447 PROM2Q8N271 834 aa10.63□□□□□ -0.71
RPA3-203ENST00000401447 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
RPA3-203ENST00000401447 GABBR2O75899 941 aa10.54□□□□□ -0.72
RPA3-203ENST00000401447 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
RPA3-203ENST00000401447 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
RPA3-203ENST00000401447 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
RPA3-203ENST00000401447 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
RPA3-203ENST00000401447 CLCN6P51797 869 aa10.38□□□□□ -0.75
RPA3-203ENST00000401447 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
RPA3-203ENST00000401447 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
RPA3-203ENST00000401447 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
RPA3-203ENST00000401447 ZNF579Q8NAF0 562 aaKnown RBP10.34□□□□□ -0.75
RPA3-203ENST00000401447 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
RPA3-203ENST00000401447 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
RPA3-203ENST00000401447 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
RPA3-203ENST00000401447 MIER1Q8N108 512 aa10.3□□□□□ -0.76
RPA3-203ENST00000401447 LHX8Q68G74 356 aa10.28□□□□□ -0.76
RPA3-203ENST00000401447 ZBTB47Q9UFB7 747 aaPredicted RBP10.24□□□□□ -0.77
RPA3-203ENST00000401447 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
RPA3-203ENST00000401447 GALR2O43603 387 aaPredicted RBP10.21□□□□□ -0.77
RPA3-203ENST00000401447 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
RPA3-203ENST00000401447 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
RPA3-203ENST00000401447 PAK3O75914 559 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms