RNA–Protein interactions for RNA: ENST00000392884.2

CD3D-202, Transcript of CD3d molecule, humanhuman

TSL 2 BASIC

Gene CD3D, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD3D-202ENST00000392884 AEBP2Q6ZN18 517 aaPredicted RBP19.34■□□□□ 0.69
CD3D-202ENST00000392884 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
CD3D-202ENST00000392884 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
CD3D-202ENST00000392884 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
CD3D-202ENST00000392884 FOXD1Q16676 465 aa15.26■□□□□ 0.03
CD3D-202ENST00000392884 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
CD3D-202ENST00000392884 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
CD3D-202ENST00000392884 ADRA2BP18089 450 aa14.48□□□□□ -0.09
CD3D-202ENST00000392884 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
CD3D-202ENST00000392884 MSH5O43196 834 aa14.18□□□□□ -0.14
CD3D-202ENST00000392884 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
CD3D-202ENST00000392884 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
CD3D-202ENST00000392884 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
CD3D-202ENST00000392884 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
CD3D-202ENST00000392884 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
CD3D-202ENST00000392884 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
CD3D-202ENST00000392884 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
CD3D-202ENST00000392884 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
CD3D-202ENST00000392884 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
CD3D-202ENST00000392884 KCNA4P22459 653 aa12.77□□□□□ -0.37
CD3D-202ENST00000392884 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
CD3D-202ENST00000392884 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
CD3D-202ENST00000392884 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
CD3D-202ENST00000392884 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
CD3D-202ENST00000392884 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
CD3D-202ENST00000392884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
CD3D-202ENST00000392884 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
CD3D-202ENST00000392884 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
CD3D-202ENST00000392884 U3KPZ7 1027 aaPredicted RBP11.93□□□□□ -0.5
CD3D-202ENST00000392884 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
CD3D-202ENST00000392884 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
CD3D-202ENST00000392884 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
CD3D-202ENST00000392884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
CD3D-202ENST00000392884 ZBTB22O15209 634 aa11.76□□□□□ -0.53
CD3D-202ENST00000392884 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
CD3D-202ENST00000392884 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
CD3D-202ENST00000392884 APLP2Q06481 763 aa11.67□□□□□ -0.54
CD3D-202ENST00000392884 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
CD3D-202ENST00000392884 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
CD3D-202ENST00000392884 CAPN15O75808 1086 aa11.54□□□□□ -0.56
CD3D-202ENST00000392884 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
CD3D-202ENST00000392884 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
CD3D-202ENST00000392884 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
CD3D-202ENST00000392884 DSG3P32926 999 aa11.48□□□□□ -0.57
CD3D-202ENST00000392884 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
CD3D-202ENST00000392884 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CD3D-202ENST00000392884 ABCB7O75027 752 aa11.28□□□□□ -0.6
CD3D-202ENST00000392884 POLA2Q14181 598 aa11.25□□□□□ -0.61
CD3D-202ENST00000392884 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
CD3D-202ENST00000392884 FBLN2P98095 1184 aa10.95□□□□□ -0.66
CD3D-202ENST00000392884 RBM42Q9BTD8 480 aaKnown RBP10.95□□□□□ -0.66
CD3D-202ENST00000392884 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CD3D-202ENST00000392884 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
CD3D-202ENST00000392884 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
CD3D-202ENST00000392884 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
CD3D-202ENST00000392884 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
CD3D-202ENST00000392884 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
CD3D-202ENST00000392884 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
CD3D-202ENST00000392884 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
CD3D-202ENST00000392884 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
CD3D-202ENST00000392884 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
CD3D-202ENST00000392884 CHRDL2Q6WN34 429 aa10.53□□□□□ -0.72
CD3D-202ENST00000392884 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
CD3D-202ENST00000392884 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
CD3D-202ENST00000392884 PROM2Q8N271 834 aa10.51□□□□□ -0.73
CD3D-202ENST00000392884 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
CD3D-202ENST00000392884 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.74
CD3D-202ENST00000392884 FKBP8Q14318 412 aa10.39□□□□□ -0.75
CD3D-202ENST00000392884 POTEHQ6S545 545 aa10.39□□□□□ -0.75
CD3D-202ENST00000392884 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
CD3D-202ENST00000392884 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
CD3D-202ENST00000392884 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
CD3D-202ENST00000392884 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
CD3D-202ENST00000392884 PRKAR2AP13861 404 aaKnown RBP10.23□□□□□ -0.77
CD3D-202ENST00000392884 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
CD3D-202ENST00000392884 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
CD3D-202ENST00000392884 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
CD3D-202ENST00000392884 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
CD3D-202ENST00000392884 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
CD3D-202ENST00000392884 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
CD3D-202ENST00000392884 MIER1Q8N108 512 aa10.01□□□□□ -0.81
CD3D-202ENST00000392884 HAX1O00165 279 aa10□□□□□ -0.81
CD3D-202ENST00000392884 PLEKHG5O94827 1062 aa10□□□□□ -0.81
CD3D-202ENST00000392884 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
CD3D-202ENST00000392884 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
CD3D-202ENST00000392884 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
CD3D-202ENST00000392884 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
CD3D-202ENST00000392884 EVX2Q03828 476 aa9.95□□□□□ -0.82
CD3D-202ENST00000392884 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
CD3D-202ENST00000392884 CD44P16070 742 aaKnown RBP9.92□□□□□ -0.82
CD3D-202ENST00000392884 CLCN6P51797 869 aa9.86□□□□□ -0.83
CD3D-202ENST00000392884 NUBP1P53384 320 aa9.86□□□□□ -0.83
CD3D-202ENST00000392884 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
CD3D-202ENST00000392884 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
CD3D-202ENST00000392884 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
CD3D-202ENST00000392884 ZRANB1Q9UGI0 708 aa9.82□□□□□ -0.84
CD3D-202ENST00000392884 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
CD3D-202ENST00000392884 CCDC61Q9Y6R9 512 aa9.79□□□□□ -0.84
CD3D-202ENST00000392884 GABBR2O75899 941 aa9.77□□□□□ -0.85
CD3D-202ENST00000392884 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms