RNA–Protein interactions for RNA: ENST00000614404.1

UBB-209, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBB, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-209ENST00000614404 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
UBB-209ENST00000614404 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
UBB-209ENST00000614404 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
UBB-209ENST00000614404 ABCC9O60706 1549 aa18.82■□□□□ 0.6
UBB-209ENST00000614404 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
UBB-209ENST00000614404 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
UBB-209ENST00000614404 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
UBB-209ENST00000614404 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
UBB-209ENST00000614404 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
UBB-209ENST00000614404 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
UBB-209ENST00000614404 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
UBB-209ENST00000614404 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
UBB-209ENST00000614404 NACADO15069 1562 aa17.62■□□□□ 0.41
UBB-209ENST00000614404 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBB-209ENST00000614404 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
UBB-209ENST00000614404 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
UBB-209ENST00000614404 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
UBB-209ENST00000614404 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
UBB-209ENST00000614404 HRCP23327 699 aa17.09■□□□□ 0.33
UBB-209ENST00000614404 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
UBB-209ENST00000614404 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
UBB-209ENST00000614404 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
UBB-209ENST00000614404 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
UBB-209ENST00000614404 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
UBB-209ENST00000614404 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
UBB-209ENST00000614404 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
UBB-209ENST00000614404 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
UBB-209ENST00000614404 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
UBB-209ENST00000614404 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
UBB-209ENST00000614404 WIZO95785 1651 aa16.68■□□□□ 0.26
UBB-209ENST00000614404 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
UBB-209ENST00000614404 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
UBB-209ENST00000614404 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
UBB-209ENST00000614404 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
UBB-209ENST00000614404 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
UBB-209ENST00000614404 CUX2O14529 1486 aa16.42■□□□□ 0.22
UBB-209ENST00000614404 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
UBB-209ENST00000614404 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
UBB-209ENST00000614404 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
UBB-209ENST00000614404 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
UBB-209ENST00000614404 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
UBB-209ENST00000614404 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
UBB-209ENST00000614404 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
UBB-209ENST00000614404 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
UBB-209ENST00000614404 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
UBB-209ENST00000614404 PELP1Q8IZL8 1130 aaKnown RBP16.19■□□□□ 0.18
UBB-209ENST00000614404 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
UBB-209ENST00000614404 NESP48681 1621 aa16.09■□□□□ 0.17
UBB-209ENST00000614404 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
UBB-209ENST00000614404 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
UBB-209ENST00000614404 ABCC8Q09428 1581 aa16■□□□□ 0.15
UBB-209ENST00000614404 EEA1Q15075 1411 aa15.97■□□□□ 0.15
UBB-209ENST00000614404 CFTRP13569 1480 aa15.93■□□□□ 0.14
UBB-209ENST00000614404 PRDM2Q13029 1718 aa15.89■□□□□ 0.13
UBB-209ENST00000614404 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
UBB-209ENST00000614404 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
UBB-209ENST00000614404 FOXD1Q16676 465 aa15.85■□□□□ 0.13
UBB-209ENST00000614404 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
UBB-209ENST00000614404 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
UBB-209ENST00000614404 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
UBB-209ENST00000614404 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
UBB-209ENST00000614404 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
UBB-209ENST00000614404 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
UBB-209ENST00000614404 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
UBB-209ENST00000614404 SOGA1O94964 1423 aa15.74■□□□□ 0.11
UBB-209ENST00000614404 CUX1P39880 1505 aa15.73■□□□□ 0.11
UBB-209ENST00000614404 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
UBB-209ENST00000614404 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
UBB-209ENST00000614404 GOLGA3Q08378 1498 aa15.71■□□□□ 0.1
UBB-209ENST00000614404 WDR62O43379 1518 aa15.7■□□□□ 0.1
UBB-209ENST00000614404 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
UBB-209ENST00000614404 KIF21BO75037 1637 aa15.7■□□□□ 0.1
UBB-209ENST00000614404 CCER1Q8TC90 406 aaPredicted RBP15.7■□□□□ 0.1
UBB-209ENST00000614404 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
UBB-209ENST00000614404 CENPBP07199 599 aaPredicted RBP15.65■□□□□ 0.1
UBB-209ENST00000614404 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
UBB-209ENST00000614404 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
UBB-209ENST00000614404 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
UBB-209ENST00000614404 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
UBB-209ENST00000614404 MYT1Q01538 1121 aa15.58■□□□□ 0.08
UBB-209ENST00000614404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
UBB-209ENST00000614404 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
UBB-209ENST00000614404 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
UBB-209ENST00000614404 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
UBB-209ENST00000614404 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
UBB-209ENST00000614404 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
UBB-209ENST00000614404 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
UBB-209ENST00000614404 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
UBB-209ENST00000614404 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
UBB-209ENST00000614404 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.07
UBB-209ENST00000614404 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
UBB-209ENST00000614404 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
UBB-209ENST00000614404 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.06
UBB-209ENST00000614404 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.06
UBB-209ENST00000614404 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.06
UBB-209ENST00000614404 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
UBB-209ENST00000614404 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
UBB-209ENST00000614404 CLIP1P30622 1438 aa15.43■□□□□ 0.06
UBB-209ENST00000614404 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
UBB-209ENST00000614404 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms