RNA–Protein interactions for RNA: ENST00000527183.1

SC5D-204, Transcript of sterol-C5-desaturase, humanhuman

TSL 2

Gene SC5D, Length 1,524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-204ENST00000527183 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
SC5D-204ENST00000527183 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
SC5D-204ENST00000527183 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
SC5D-204ENST00000527183 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
SC5D-204ENST00000527183 FOXD1Q16676 465 aa19.94■□□□□ 0.78
SC5D-204ENST00000527183 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
SC5D-204ENST00000527183 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
SC5D-204ENST00000527183 MSH5O43196 834 aa18.63■□□□□ 0.57
SC5D-204ENST00000527183 ADRA2BP18089 450 aa18.63■□□□□ 0.57
SC5D-204ENST00000527183 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
SC5D-204ENST00000527183 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
SC5D-204ENST00000527183 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
SC5D-204ENST00000527183 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.31
SC5D-204ENST00000527183 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
SC5D-204ENST00000527183 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
SC5D-204ENST00000527183 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
SC5D-204ENST00000527183 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
SC5D-204ENST00000527183 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
SC5D-204ENST00000527183 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
SC5D-204ENST00000527183 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
SC5D-204ENST00000527183 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
SC5D-204ENST00000527183 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
SC5D-204ENST00000527183 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
SC5D-204ENST00000527183 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
SC5D-204ENST00000527183 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
SC5D-204ENST00000527183 KCNA4P22459 653 aa15.61■□□□□ 0.09
SC5D-204ENST00000527183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.09
SC5D-204ENST00000527183 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.03
SC5D-204ENST00000527183 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
SC5D-204ENST00000527183 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
SC5D-204ENST00000527183 CAPN15O75808 1086 aa15.01□□□□□ -0.01
SC5D-204ENST00000527183 DSG3P32926 999 aa14.92□□□□□ -0.02
SC5D-204ENST00000527183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
SC5D-204ENST00000527183 APLP2Q06481 763 aa14.82□□□□□ -0.04
SC5D-204ENST00000527183 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
SC5D-204ENST00000527183 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
SC5D-204ENST00000527183 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
SC5D-204ENST00000527183 ZNF219Q9P2Y4 722 aaPredicted RBP14.74□□□□□ -0.05
SC5D-204ENST00000527183 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
SC5D-204ENST00000527183 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
SC5D-204ENST00000527183 ABCB7O75027 752 aa14.66□□□□□ -0.06
SC5D-204ENST00000527183 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
SC5D-204ENST00000527183 POLA2Q14181 598 aa14.4□□□□□ -0.1
SC5D-204ENST00000527183 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
SC5D-204ENST00000527183 ZBTB22O15209 634 aa14.36□□□□□ -0.11
SC5D-204ENST00000527183 POTEHQ6S545 545 aa14.2□□□□□ -0.14
SC5D-204ENST00000527183 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
SC5D-204ENST00000527183 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
SC5D-204ENST00000527183 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
SC5D-204ENST00000527183 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
SC5D-204ENST00000527183 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
SC5D-204ENST00000527183 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
SC5D-204ENST00000527183 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
SC5D-204ENST00000527183 FBLN2P98095 1184 aa13.76□□□□□ -0.21
SC5D-204ENST00000527183 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
SC5D-204ENST00000527183 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
SC5D-204ENST00000527183 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
SC5D-204ENST00000527183 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
SC5D-204ENST00000527183 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
SC5D-204ENST00000527183 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
SC5D-204ENST00000527183 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
SC5D-204ENST00000527183 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SC5D-204ENST00000527183 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
SC5D-204ENST00000527183 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
SC5D-204ENST00000527183 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
SC5D-204ENST00000527183 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
SC5D-204ENST00000527183 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
SC5D-204ENST00000527183 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
SC5D-204ENST00000527183 HAX1O00165 279 aa13.32□□□□□ -0.28
SC5D-204ENST00000527183 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
SC5D-204ENST00000527183 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
SC5D-204ENST00000527183 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
SC5D-204ENST00000527183 EVX2Q03828 476 aa13.18□□□□□ -0.3
SC5D-204ENST00000527183 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
SC5D-204ENST00000527183 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
SC5D-204ENST00000527183 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
SC5D-204ENST00000527183 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
SC5D-204ENST00000527183 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
SC5D-204ENST00000527183 GABBR2O75899 941 aa12.88□□□□□ -0.35
SC5D-204ENST00000527183 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
SC5D-204ENST00000527183 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
SC5D-204ENST00000527183 PROM2Q8N271 834 aa12.74□□□□□ -0.37
SC5D-204ENST00000527183 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
SC5D-204ENST00000527183 CLCN6P51797 869 aa12.67□□□□□ -0.38
SC5D-204ENST00000527183 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
SC5D-204ENST00000527183 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
SC5D-204ENST00000527183 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
SC5D-204ENST00000527183 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
SC5D-204ENST00000527183 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
SC5D-204ENST00000527183 LHX8Q68G74 356 aa12.52□□□□□ -0.4
SC5D-204ENST00000527183 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.4
SC5D-204ENST00000527183 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
SC5D-204ENST00000527183 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
SC5D-204ENST00000527183 FKBP8Q14318 412 aa12.45□□□□□ -0.42
SC5D-204ENST00000527183 MIER1Q8N108 512 aa12.45□□□□□ -0.42
SC5D-204ENST00000527183 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
SC5D-204ENST00000527183 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
SC5D-204ENST00000527183 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
SC5D-204ENST00000527183 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
SC5D-204ENST00000527183 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms