Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.36■□□□□ 0.69
MDH1P40925 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
MDH1P40925 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MDH1P40925 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MDH1P40925 UNC93B3-201ENST00000308076 687 ntBASIC19.36■□□□□ 0.69
MDH1P40925 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.36■□□□□ 0.69
MDH1P40925 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.36■□□□□ 0.69
MDH1P40925 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.36■□□□□ 0.69
MDH1P40925 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
MDH1P40925 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MDH1P40925 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MDH1P40925 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.36■□□□□ 0.69
MDH1P40925 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MDH1P40925 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MDH1P40925 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
MDH1P40925 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.35■□□□□ 0.69
MDH1P40925 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
MDH1P40925 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MDH1P40925 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.35■□□□□ 0.69
MDH1P40925 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 ZNF815P-204ENST00000434898 1737 ntBASIC19.35■□□□□ 0.69
MDH1P40925 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
MDH1P40925 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.35■□□□□ 0.69
MDH1P40925 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.35■□□□□ 0.69
MDH1P40925 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MDH1P40925 AC024257.2-201ENST00000549699 147 ntBASIC19.35■□□□□ 0.69
MDH1P40925 LINC00896-202ENST00000609602 2128 ntBASIC19.35■□□□□ 0.69
MDH1P40925 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MDH1P40925 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.35■□□□□ 0.69
MDH1P40925 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.35■□□□□ 0.69
MDH1P40925 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MDH1P40925 CYP21A1P-202ENST00000354927 1481 ntBASIC19.35■□□□□ 0.69
MDH1P40925 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MDH1P40925 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MDH1P40925 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
MDH1P40925 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.34■□□□□ 0.69
MDH1P40925 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 KRT18P20-201ENST00000548986 1279 ntBASIC19.34■□□□□ 0.69
MDH1P40925 AP001160.3-201ENST00000601484 763 ntBASIC19.34■□□□□ 0.69
MDH1P40925 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.34■□□□□ 0.69
MDH1P40925 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MDH1P40925 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
MDH1P40925 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.33■□□□□ 0.69
MDH1P40925 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.33■□□□□ 0.69
MDH1P40925 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MDH1P40925 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
MDH1P40925 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MDH1P40925 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MDH1P40925 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MDH1P40925 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MDH1P40925 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.33■□□□□ 0.69
MDH1P40925 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
MDH1P40925 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MDH1P40925 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.33■□□□□ 0.68
MDH1P40925 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.33■□□□□ 0.68
MDH1P40925 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms