Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH17O14917 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH17O14917 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH17O14917 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PCDH17O14917 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH17O14917 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH17O14917 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH17O14917 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH17O14917 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH17O14917 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 TUBB8P6-201ENST00000436895 1288 ntBASIC18.39■□□□□ 0.53
PCDH17O14917 AL355355.2-201ENST00000442321 338 ntBASIC18.39■□□□□ 0.53
PCDH17O14917 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.39■□□□□ 0.53
PCDH17O14917 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH17O14917 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH17O14917 AC026471.5-201ENST00000615068 467 ntBASIC18.39■□□□□ 0.53
PCDH17O14917 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH17O14917 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH17O14917 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH17O14917 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH17O14917 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH17O14917 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH17O14917 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 TNXA-203ENST00000507684 2038 ntBASIC18.38■□□□□ 0.53
PCDH17O14917 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDH17O14917 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH17O14917 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
PCDH17O14917 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH17O14917 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH17O14917 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 TSPY7P-201ENST00000431358 1114 ntBASIC18.37■□□□□ 0.53
PCDH17O14917 FAM210CP-201ENST00000445714 574 ntBASIC18.37■□□□□ 0.53
PCDH17O14917 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 AC026271.3-201ENST00000571884 352 ntBASIC18.37■□□□□ 0.53
PCDH17O14917 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH17O14917 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH17O14917 LINC01023-201ENST00000606054 436 ntBASIC18.37■□□□□ 0.53
PCDH17O14917 AC004408.2-201ENST00000623613 2777 ntBASIC18.37■□□□□ 0.53
PCDH17O14917 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PCDH17O14917 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH17O14917 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH17O14917 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH17O14917 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH17O14917 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 KRT16P1-201ENST00000399124 1418 ntBASIC18.36■□□□□ 0.53
PCDH17O14917 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH17O14917 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH17O14917 BX088651.1-201ENST00000540551 451 ntBASIC18.36■□□□□ 0.53
PCDH17O14917 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH17O14917 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms