Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNPO3Q9Y5L0 AL020996.1-203ENST00000536896 2307 ntBASIC18.83■□□□□ 0.6
TNPO3Q9Y5L0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNPO3Q9Y5L0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.83■□□□□ 0.6
TNPO3Q9Y5L0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TNPO3Q9Y5L0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 AC004408.2-201ENST00000623613 2777 ntBASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 SDHAP1-207ENST00000440850 2000 ntBASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 UNC93B5-201ENST00000530315 699 ntBASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TNPO3Q9Y5L0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNPO3Q9Y5L0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNPO3Q9Y5L0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms