Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 TNXA-203ENST00000507684 2038 ntBASIC18.76■□□□□ 0.59
SGO1Q5FBB7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SGO1Q5FBB7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 HLA-L-209ENST00000420110 1011 ntBASIC18.74■□□□□ 0.59
SGO1Q5FBB7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.74■□□□□ 0.59
SGO1Q5FBB7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 AC142086.2-201ENST00000569753 217 ntBASIC18.73■□□□□ 0.59
SGO1Q5FBB7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 AC008687.6-201ENST00000596318 630 ntBASIC18.73■□□□□ 0.59
SGO1Q5FBB7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SGO1Q5FBB7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 ZNF815P-204ENST00000434898 1737 ntBASIC18.72■□□□□ 0.59
SGO1Q5FBB7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms