Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.23■□□□□ 0.83
HADHBP55084 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
HADHBP55084 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.23■□□□□ 0.83
HADHBP55084 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HADHBP55084 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.23■□□□□ 0.83
HADHBP55084 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HADHBP55084 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.23■□□□□ 0.83
HADHBP55084 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HADHBP55084 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HADHBP55084 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HADHBP55084 NEFHP1-201ENST00000412845 2629 ntBASIC20.23■□□□□ 0.83
HADHBP55084 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
HADHBP55084 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.22■□□□□ 0.83
HADHBP55084 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.22■□□□□ 0.83
HADHBP55084 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.22■□□□□ 0.83
HADHBP55084 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.22■□□□□ 0.83
HADHBP55084 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 AC069152.1-201ENST00000438030 544 ntBASIC20.22■□□□□ 0.83
HADHBP55084 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HADHBP55084 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.22■□□□□ 0.83
HADHBP55084 AC142086.2-201ENST00000569753 217 ntBASIC20.22■□□□□ 0.83
HADHBP55084 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.22■□□□□ 0.83
HADHBP55084 AC133041.1-202ENST00000642053 222 ntBASIC20.22■□□□□ 0.83
HADHBP55084 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.22■□□□□ 0.83
HADHBP55084 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HADHBP55084 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
HADHBP55084 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.21■□□□□ 0.83
HADHBP55084 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.21■□□□□ 0.83
HADHBP55084 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HADHBP55084 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
HADHBP55084 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.21■□□□□ 0.83
HADHBP55084 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.21■□□□□ 0.83
HADHBP55084 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HADHBP55084 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.21■□□□□ 0.83
HADHBP55084 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
HADHBP55084 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
HADHBP55084 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HADHBP55084 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
HADHBP55084 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.2■□□□□ 0.82
HADHBP55084 UNC93B4-201ENST00000505679 747 ntBASIC20.2■□□□□ 0.82
HADHBP55084 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.2■□□□□ 0.82
HADHBP55084 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.2■□□□□ 0.82
HADHBP55084 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.2■□□□□ 0.82
HADHBP55084 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.2■□□□□ 0.82
HADHBP55084 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HADHBP55084 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.2■□□□□ 0.82
HADHBP55084 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HADHBP55084 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHBP55084 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.19■□□□□ 0.82
HADHBP55084 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HADHBP55084 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HADHBP55084 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HADHBP55084 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms