Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
EPHB4P54760 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHB4P54760 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHB4P54760 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
EPHB4P54760 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
EPHB4P54760 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.67■■□□□ 1.06
EPHB4P54760 TSPY5P-201ENST00000426936 936 ntBASIC21.67■■□□□ 1.06
EPHB4P54760 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHB4P54760 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.67■■□□□ 1.06
EPHB4P54760 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHB4P54760 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
EPHB4P54760 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHB4P54760 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHB4P54760 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.66■■□□□ 1.06
EPHB4P54760 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
EPHB4P54760 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 HMGA1P5-201ENST00000412453 271 ntBASIC21.66■■□□□ 1.06
EPHB4P54760 PCED1CP-201ENST00000419887 785 ntBASIC21.66■■□□□ 1.06
EPHB4P54760 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.66■■□□□ 1.06
EPHB4P54760 AL450487.1-201ENST00000426799 995 ntBASIC21.66■■□□□ 1.06
EPHB4P54760 AC004980.1-204ENST00000429707 299 ntBASIC21.66■■□□□ 1.06
EPHB4P54760 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.66■■□□□ 1.06
EPHB4P54760 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.66■■□□□ 1.06
EPHB4P54760 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.66■■□□□ 1.06
EPHB4P54760 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
EPHB4P54760 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EPHB4P54760 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
EPHB4P54760 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.66■■□□□ 1.06
EPHB4P54760 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
EPHB4P54760 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHB4P54760 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHB4P54760 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
EPHB4P54760 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
EPHB4P54760 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHB4P54760 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHB4P54760 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
EPHB4P54760 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHB4P54760 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHB4P54760 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHB4P54760 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHB4P54760 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.65■■□□□ 1.06
EPHB4P54760 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EPHB4P54760 AC093458.2-201ENST00000623150 629 ntBASIC21.65■■□□□ 1.06
EPHB4P54760 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.65■■□□□ 1.06
EPHB4P54760 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHB4P54760 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHB4P54760 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHB4P54760 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHB4P54760 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
EPHB4P54760 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EPHB4P54760 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EPHB4P54760 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.64■■□□□ 1.06
EPHB4P54760 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
EPHB4P54760 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.64■■□□□ 1.06
EPHB4P54760 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.64■■□□□ 1.05
EPHB4P54760 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.64■■□□□ 1.05
EPHB4P54760 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
EPHB4P54760 AC087289.5-201ENST00000586076 3175 ntBASIC21.64■■□□□ 1.05
EPHB4P54760 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EPHB4P54760 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
EPHB4P54760 AC007225.1-201ENST00000566331 1836 ntBASIC21.64■■□□□ 1.05
EPHB4P54760 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.63■■□□□ 1.05
EPHB4P54760 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.63■■□□□ 1.05
EPHB4P54760 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EPHB4P54760 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms