Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CYP2T3P-201ENST00000601990 817 ntBASIC17.35■□□□□ 0.37
HLA-DPB1P04440 AL121832.2-201ENST00000610979 668 ntBASIC17.35■□□□□ 0.37
HLA-DPB1P04440 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPB1P04440 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 AL390961.4-201ENST00000623958 2535 ntBASIC17.34■□□□□ 0.37
HLA-DPB1P04440 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPB1P04440 AC104581.1-202ENST00000635932 2618 ntBASIC17.34■□□□□ 0.37
HLA-DPB1P04440 AC009113.1-201ENST00000570267 2443 ntBASIC17.33■□□□□ 0.37
HLA-DPB1P04440 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 AL161938.1-201ENST00000569833 2180 ntBASIC17.33■□□□□ 0.37
HLA-DPB1P04440 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 KRT17P1-201ENST00000399211 1546 ntBASIC17.33■□□□□ 0.37
HLA-DPB1P04440 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DPB1P04440 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 GPX1P1-201ENST00000388829 606 ntBASIC17.33■□□□□ 0.36
HLA-DPB1P04440 NCF1B-203ENST00000435988 1254 ntBASIC17.33■□□□□ 0.36
HLA-DPB1P04440 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 AC135050.7-201ENST00000624508 2218 ntBASIC17.33■□□□□ 0.36
HLA-DPB1P04440 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DPB1P04440 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DPB1P04440 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms