Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.69■□□□□ 0.9
SPTLC1O15269 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.69■□□□□ 0.9
SPTLC1O15269 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.69■□□□□ 0.9
SPTLC1O15269 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.69■□□□□ 0.9
SPTLC1O15269 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC1O15269 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC1O15269 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.69■□□□□ 0.9
SPTLC1O15269 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPTLC1O15269 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC1O15269 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SPTLC1O15269 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.68■□□□□ 0.9
SPTLC1O15269 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 CRYGFP-201ENST00000418459 633 ntBASIC20.68■□□□□ 0.9
SPTLC1O15269 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.68■□□□□ 0.9
SPTLC1O15269 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.68■□□□□ 0.9
SPTLC1O15269 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AL049597.2-201ENST00000565575 961 ntBASIC20.68■□□□□ 0.9
SPTLC1O15269 SLC25A1P4-201ENST00000567977 778 ntBASIC20.68■□□□□ 0.9
SPTLC1O15269 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AP005242.2-201ENST00000580065 1175 ntBASIC20.68■□□□□ 0.9
SPTLC1O15269 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPTLC1O15269 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 AFG3L1P-217ENST00000557444 2447 ntBASIC20.68■□□□□ 0.9
SPTLC1O15269 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC1O15269 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC1O15269 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC1O15269 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
SPTLC1O15269 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC1O15269 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC1O15269 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.67■□□□□ 0.9
SPTLC1O15269 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC1O15269 FAM207BP-201ENST00000447172 505 ntBASIC20.67■□□□□ 0.9
SPTLC1O15269 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.67■□□□□ 0.9
SPTLC1O15269 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.67■□□□□ 0.9
SPTLC1O15269 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.67■□□□□ 0.9
SPTLC1O15269 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
SPTLC1O15269 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC1O15269 ZNF815P-204ENST00000434898 1737 ntBASIC20.67■□□□□ 0.9
SPTLC1O15269 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SPTLC1O15269 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC1O15269 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.67■□□□□ 0.9
SPTLC1O15269 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC1O15269 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SPTLC1O15269 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
SPTLC1O15269 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTLC1O15269 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SPTLC1O15269 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC1O15269 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC1O15269 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.66■□□□□ 0.9
SPTLC1O15269 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC1O15269 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPTLC1O15269 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 SDHAP1-207ENST00000440850 2000 ntBASIC20.65■□□□□ 0.9
SPTLC1O15269 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.65■□□□□ 0.9
SPTLC1O15269 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC1O15269 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms