Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM17Q9Y577 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 KRT18P31-201ENST00000506277 1292 ntBASIC21.9■■□□□ 1.1
TRIM17Q9Y577 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 MIR4674-201ENST00000582457 87 ntBASIC21.9■■□□□ 1.1
TRIM17Q9Y577 BX640515.1-201ENST00000617215 977 ntBASIC21.9■■□□□ 1.1
TRIM17Q9Y577 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 AC244015.2-201ENST00000616358 1861 ntBASIC21.9■■□□□ 1.1
TRIM17Q9Y577 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM17Q9Y577 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM17Q9Y577 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
TRIM17Q9Y577 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM17Q9Y577 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 AL590627.1-203ENST00000421194 1026 ntBASIC21.89■■□□□ 1.09
TRIM17Q9Y577 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 LINC00265-3P-201ENST00000447588 903 ntBASIC21.89■■□□□ 1.09
TRIM17Q9Y577 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM17Q9Y577 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 PMS2P1-201ENST00000431037 1228 ntBASIC21.88■■□□□ 1.09
TRIM17Q9Y577 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TRIM17Q9Y577 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 HLA-A-201ENST00000376802 1334 ntBASIC21.87■■□□□ 1.09
TRIM17Q9Y577 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 AL024507.2-201ENST00000606070 2574 ntBASIC21.87■■□□□ 1.09
TRIM17Q9Y577 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 TPSP2-201ENST00000561760 610 ntBASIC21.87■■□□□ 1.09
TRIM17Q9Y577 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 AL121912.1-201ENST00000603683 238 ntBASIC21.87■■□□□ 1.09
TRIM17Q9Y577 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 Z98882.1-201ENST00000622160 2253 ntBASIC21.87■■□□□ 1.09
TRIM17Q9Y577 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM17Q9Y577 AL162741.1-201ENST00000565563 1558 ntBASIC21.87■■□□□ 1.09
TRIM17Q9Y577 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM17Q9Y577 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms