Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIN7CQ9NUP9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LIN7CQ9NUP9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 AC083880.1-201ENST00000608266 535 ntBASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIN7CQ9NUP9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms