Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.63■□□□□ 0.41
NPAS1Q99742 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NPAS1Q99742 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.62■□□□□ 0.41
NPAS1Q99742 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS1Q99742 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NPAS1Q99742 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS1Q99742 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS1Q99742 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.62■□□□□ 0.41
NPAS1Q99742 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.62■□□□□ 0.41
NPAS1Q99742 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS1Q99742 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS1Q99742 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS1Q99742 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS1Q99742 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
NPAS1Q99742 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NPAS1Q99742 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.61■□□□□ 0.41
NPAS1Q99742 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.61■□□□□ 0.41
NPAS1Q99742 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.61■□□□□ 0.41
NPAS1Q99742 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS1Q99742 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS1Q99742 RPS2P4-201ENST00000476944 856 ntBASIC17.61■□□□□ 0.41
NPAS1Q99742 AC008550.1-201ENST00000511500 884 ntBASIC17.61■□□□□ 0.41
NPAS1Q99742 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS1Q99742 HLA-A-209ENST00000638375 975 ntBASIC17.61■□□□□ 0.41
NPAS1Q99742 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
NPAS1Q99742 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS1Q99742 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS1Q99742 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 AC093484.2-201ENST00000580996 2166 ntBASIC17.6■□□□□ 0.41
NPAS1Q99742 AC116562.4-201ENST00000641316 2276 ntBASIC17.6■□□□□ 0.41
NPAS1Q99742 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS1Q99742 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NPAS1Q99742 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS1Q99742 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 RARRES2P10-201ENST00000564312 460 ntBASIC17.6■□□□□ 0.41
NPAS1Q99742 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS1Q99742 AF186192.3-201ENST00000583427 947 ntBASIC17.6■□□□□ 0.41
NPAS1Q99742 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS1Q99742 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.6■□□□□ 0.41
NPAS1Q99742 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.6■□□□□ 0.41
NPAS1Q99742 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
NPAS1Q99742 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS1Q99742 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NPAS1Q99742 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS1Q99742 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS1Q99742 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS1Q99742 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS1Q99742 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NPAS1Q99742 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS1Q99742 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms