Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.84■□□□□ 0.61
PKP4Q99569 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.84■□□□□ 0.61
PKP4Q99569 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.84■□□□□ 0.61
PKP4Q99569 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.84■□□□□ 0.61
PKP4Q99569 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 AC005332.7-201ENST00000614046 2005 ntBASIC18.84■□□□□ 0.61
PKP4Q99569 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 LINC01465-201ENST00000408887 1940 ntBASIC18.84■□□□□ 0.61
PKP4Q99569 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.84■□□□□ 0.61
PKP4Q99569 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP4Q99569 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP4Q99569 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PKP4Q99569 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.83■□□□□ 0.61
PKP4Q99569 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP4Q99569 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PKP4Q99569 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP4Q99569 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP4Q99569 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.83■□□□□ 0.6
PKP4Q99569 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP4Q99569 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.83■□□□□ 0.6
PKP4Q99569 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP4Q99569 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP4Q99569 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP4Q99569 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PKP4Q99569 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PKP4Q99569 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.82■□□□□ 0.6
PKP4Q99569 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP4Q99569 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.82■□□□□ 0.6
PKP4Q99569 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.82■□□□□ 0.6
PKP4Q99569 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP4Q99569 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP4Q99569 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP4Q99569 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP4Q99569 SDHAP1-207ENST00000440850 2000 ntBASIC18.81■□□□□ 0.6
PKP4Q99569 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.81■□□□□ 0.6
PKP4Q99569 AL032819.2-201ENST00000624543 2162 ntBASIC18.81■□□□□ 0.6
PKP4Q99569 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PKP4Q99569 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP4Q99569 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP4Q99569 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP4Q99569 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.81■□□□□ 0.6
PKP4Q99569 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.81■□□□□ 0.6
PKP4Q99569 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP4Q99569 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP4Q99569 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP4Q99569 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP4Q99569 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PKP4Q99569 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.8■□□□□ 0.6
PKP4Q99569 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.8■□□□□ 0.6
PKP4Q99569 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PKP4Q99569 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PKP4Q99569 UBE2SP1-201ENST00000450587 669 ntBASIC18.8■□□□□ 0.6
PKP4Q99569 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP4Q99569 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms