Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 AC067852.2-201ENST00000590513 2313 ntBASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 IRX1P1-201ENST00000438849 1838 ntBASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2Q8WWK9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 FZD10-202ENST00000539839 3282 ntBASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2Q8WWK9 ABALON-201ENST00000629058 1903 ntBASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 TERF1P2-201ENST00000583350 1212 ntBASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2Q8WWK9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 AC142381.2-201ENST00000566120 298 ntBASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 AC016405.3-201ENST00000607710 860 ntBASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 AC018553.1-201ENST00000616682 1458 ntBASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms