Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
SVIPQ8NHG7 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 FP700111.2-201ENST00000619190 1892 ntBASIC12.17□□□□□ -0.46
SVIPQ8NHG7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 AC138035.3-201ENST00000622706 2791 ntBASIC12.17□□□□□ -0.46
SVIPQ8NHG7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 HERC2P10-201ENST00000570209 2393 ntBASIC12.17□□□□□ -0.46
SVIPQ8NHG7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC12.17□□□□□ -0.46
SVIPQ8NHG7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 GRK6P1-201ENST00000400595 1711 ntBASIC12.16□□□□□ -0.46
SVIPQ8NHG7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 AL138781.2-201ENST00000617896 1843 ntBASIC12.16□□□□□ -0.46
SVIPQ8NHG7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 AC106881.1-201ENST00000605849 3329 ntBASIC12.16□□□□□ -0.46
SVIPQ8NHG7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SVIPQ8NHG7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms