Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.83■□□□□ 0.6
EPHA3P29320 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
EPHA3P29320 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHA3P29320 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA3P29320 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA3P29320 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA3P29320 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
EPHA3P29320 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
EPHA3P29320 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.82■□□□□ 0.6
EPHA3P29320 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHA3P29320 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.82■□□□□ 0.6
EPHA3P29320 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHA3P29320 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
EPHA3P29320 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHA3P29320 AC018470.1-201ENST00000624790 3129 ntBASIC18.82■□□□□ 0.6
EPHA3P29320 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA3P29320 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA3P29320 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 WIZP1-201ENST00000531444 2299 ntBASIC18.81■□□□□ 0.6
EPHA3P29320 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 TFP1-202ENST00000475455 1573 ntBASIC18.81■□□□□ 0.6
EPHA3P29320 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.81■□□□□ 0.6
EPHA3P29320 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
EPHA3P29320 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.81■□□□□ 0.6
EPHA3P29320 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EPHA3P29320 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA3P29320 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA3P29320 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA3P29320 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.8■□□□□ 0.6
EPHA3P29320 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA3P29320 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.8■□□□□ 0.6
EPHA3P29320 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.8■□□□□ 0.6
EPHA3P29320 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA3P29320 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.8■□□□□ 0.6
EPHA3P29320 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 AC087623.3-201ENST00000607047 1098 ntBASIC18.8■□□□□ 0.6
EPHA3P29320 BID-214ENST00000617586 542 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHA3P29320 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHA3P29320 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHA3P29320 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHA3P29320 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA3P29320 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA3P29320 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.79■□□□□ 0.6
EPHA3P29320 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms