Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC28A2O43868 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC28A2O43868 AC105020.6-201ENST00000621523 1217 ntBASIC18.62■□□□□ 0.57
SLC28A2O43868 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A2O43868 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 KRT8P9-201ENST00000558927 1449 ntBASIC18.61■□□□□ 0.57
SLC28A2O43868 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC28A2O43868 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC28A2O43868 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
SLC28A2O43868 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 AC006557.6-201ENST00000623071 864 ntBASIC18.61■□□□□ 0.57
SLC28A2O43868 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A2O43868 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A2O43868 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC28A2O43868 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 PTBP1P-201ENST00000554374 1601 ntBASIC18.6■□□□□ 0.57
SLC28A2O43868 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 KRT8P17-201ENST00000453110 1448 ntBASIC18.6■□□□□ 0.57
SLC28A2O43868 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC28A2O43868 KRT18P22-201ENST00000402024 1347 ntBASIC18.6■□□□□ 0.57
SLC28A2O43868 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC28A2O43868 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC28A2O43868 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SLC28A2O43868 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC28A2O43868 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A2O43868 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC28A2O43868 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SLC28A2O43868 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC28A2O43868 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A2O43868 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A2O43868 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A2O43868 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A2O43868 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SLC28A2O43868 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 FAM197Y1-201ENST00000421178 764 ntBASIC18.59■□□□□ 0.57
SLC28A2O43868 RBM17P1-201ENST00000453646 1190 ntBASIC18.59■□□□□ 0.57
SLC28A2O43868 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC28A2O43868 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC28A2O43868 KRT126P-201ENST00000549467 1181 ntBASIC18.59■□□□□ 0.57
SLC28A2O43868 AF186192.3-201ENST00000583427 947 ntBASIC18.59■□□□□ 0.57
SLC28A2O43868 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC28A2O43868 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC28A2O43868 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A2O43868 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms