Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 PCDH8P1-201ENST00000428983 2773 ntBASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01558Q9Y6Z2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 CHML-205ENST00000638160 705 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01558Q9Y6Z2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms