Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RHBDD3Q9Y3P4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.97■□□□□ 0.31
RHBDD3Q9Y3P4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RHBDD3Q9Y3P4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.97■□□□□ 0.31
RHBDD3Q9Y3P4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RHBDD3Q9Y3P4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.96■□□□□ 0.3
RHBDD3Q9Y3P4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 AC018553.1-201ENST00000616682 1458 ntBASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 AC073210.2-201ENST00000430369 194 ntBASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 AC083880.1-201ENST00000608266 535 ntBASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 LINC01465-201ENST00000408887 1940 ntBASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDD3Q9Y3P4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 AC092368.3-202ENST00000574180 1591 ntBASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 AC133041.1-202ENST00000642053 222 ntBASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RHBDD3Q9Y3P4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 AC069152.1-201ENST00000438030 544 ntBASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDD3Q9Y3P4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms