Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA4Q9UN74 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 SDHAP1-207ENST00000440850 2000 ntBASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 KSR1P1-201ENST00000446298 240 ntBASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 AL160286.2-201ENST00000567150 934 ntBASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 AC073195.1-201ENST00000607241 877 ntBASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA4Q9UN74 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 AC012618.2-201ENST00000428058 849 ntBASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 AC233702.5-201ENST00000584107 538 ntBASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 Z99916.2-201ENST00000604037 246 ntBASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA4Q9UN74 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 AC008550.1-201ENST00000511500 884 ntBASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 AC005332.7-201ENST00000614046 2005 ntBASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA4Q9UN74 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 AC004980.1-204ENST00000429707 299 ntBASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA4Q9UN74 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 KRT16P1-201ENST00000399124 1418 ntBASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PCDHA4Q9UN74 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 CR392000.1-201ENST00000624770 1228 ntBASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 AP006294.2-201ENST00000641667 209 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms