Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.65■□□□□ 0.74
HHIPQ96QV1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
HHIPQ96QV1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HHIPQ96QV1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HHIPQ96QV1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HHIPQ96QV1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HHIPQ96QV1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.65■□□□□ 0.74
HHIPQ96QV1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
HHIPQ96QV1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.65■□□□□ 0.74
HHIPQ96QV1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.64■□□□□ 0.74
HHIPQ96QV1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.64■□□□□ 0.74
HHIPQ96QV1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HHIPQ96QV1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
HHIPQ96QV1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HHIPQ96QV1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HHIPQ96QV1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 TSPY5P-201ENST00000426936 936 ntBASIC19.64■□□□□ 0.73
HHIPQ96QV1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.64■□□□□ 0.73
HHIPQ96QV1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 COX11P1-201ENST00000489116 835 ntBASIC19.64■□□□□ 0.73
HHIPQ96QV1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.64■□□□□ 0.73
HHIPQ96QV1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HHIPQ96QV1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HHIPQ96QV1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.63■□□□□ 0.73
HHIPQ96QV1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 SMG8-203ENST00000578922 2178 ntBASIC19.62■□□□□ 0.73
HHIPQ96QV1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 AC010653.2-201ENST00000623505 997 ntBASIC19.62■□□□□ 0.73
HHIPQ96QV1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.62■□□□□ 0.73
HHIPQ96QV1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HHIPQ96QV1 TMEM179-206ENST00000616017 1645 ntBASIC19.62■□□□□ 0.73
HHIPQ96QV1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 Z85996.1-201ENST00000494644 937 ntBASIC19.61■□□□□ 0.73
HHIPQ96QV1 KRT18P56-201ENST00000507275 550 ntBASIC19.61■□□□□ 0.73
HHIPQ96QV1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HHIPQ96QV1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.61■□□□□ 0.73
HHIPQ96QV1 AC141257.4-201ENST00000634557 245 ntBASIC19.61■□□□□ 0.73
HHIPQ96QV1 AC136944.6-201ENST00000634818 245 ntBASIC19.61■□□□□ 0.73
HHIPQ96QV1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms