Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 AC006128.1-201ENST00000624704 1661 ntBASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC10.65□□□□□ -0.7
SPTSSBQ8NFR3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SPTSSBQ8NFR3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SPTSSBQ8NFR3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SPTSSBQ8NFR3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SPTSSBQ8NFR3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SPTSSBQ8NFR3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 MIR193BHG-211ENST00000641433 5365 ntBASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 AL136379.1-201ENST00000623471 2642 ntBASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 LBH-205ENST00000407930 756 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 RPS2P7-201ENST00000447334 885 ntBASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SPTSSBQ8NFR3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms