Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 Z82202.1-201ENST00000623446 1880 ntBASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 RPS2P55-201ENST00000397318 883 ntBASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 AC107956.1-201ENST00000494359 873 ntBASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCUBE3Q8IX30 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.39■□□□□ 0.86
SCUBE3Q8IX30 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCUBE3Q8IX30 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.39■□□□□ 0.86
SCUBE3Q8IX30 ZNF815P-204ENST00000434898 1737 ntBASIC20.39■□□□□ 0.86
SCUBE3Q8IX30 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCUBE3Q8IX30 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 AL353708.3-201ENST00000610272 989 ntBASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 AC116562.4-201ENST00000641316 2276 ntBASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.39■□□□□ 0.85
SCUBE3Q8IX30 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 AL135905.2-201ENST00000584934 1404 ntBASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 NIFKP9-201ENST00000419265 221 ntBASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 AL353807.1-201ENST00000427475 662 ntBASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 AC008550.1-201ENST00000511500 884 ntBASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 AC104417.2-201ENST00000562989 1793 ntBASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.38■□□□□ 0.85
SCUBE3Q8IX30 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.37■□□□□ 0.85
SCUBE3Q8IX30 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms