Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 AC110285.5-201ENST00000611501 352 ntBASIC15.85■□□□□ 0.13
TREML4Q6UXN2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.85■□□□□ 0.13
TREML4Q6UXN2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREML4Q6UXN2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREML4Q6UXN2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.83■□□□□ 0.12
TREML4Q6UXN2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 AC092865.7-201ENST00000641832 219 ntBASIC15.83■□□□□ 0.12
TREML4Q6UXN2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.83■□□□□ 0.12
TREML4Q6UXN2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.83■□□□□ 0.12
TREML4Q6UXN2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 Z82202.1-201ENST00000623446 1880 ntBASIC15.82■□□□□ 0.12
TREML4Q6UXN2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 RARRES2P10-201ENST00000564312 460 ntBASIC15.82■□□□□ 0.12
TREML4Q6UXN2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 C2orf69P4-201ENST00000565394 541 ntBASIC15.82■□□□□ 0.12
TREML4Q6UXN2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.82■□□□□ 0.12
TREML4Q6UXN2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms