Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN12P56749 MCRIP2P1-201ENST00000394346 511 ntBASIC16.85■□□□□ 0.29
CLDN12P56749 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLDN12P56749 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN12P56749 AC105020.6-201ENST00000621523 1217 ntBASIC16.85■□□□□ 0.29
CLDN12P56749 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN12P56749 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN12P56749 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN12P56749 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN12P56749 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN12P56749 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN12P56749 AC141586.3-201ENST00000562166 1838 ntBASIC16.84■□□□□ 0.29
CLDN12P56749 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN12P56749 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 WIZP1-201ENST00000531444 2299 ntBASIC16.84■□□□□ 0.29
CLDN12P56749 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN12P56749 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN12P56749 MFSD11-216ENST00000590393 1141 ntBASIC16.84■□□□□ 0.29
CLDN12P56749 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN12P56749 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN12P56749 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN12P56749 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN12P56749 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN12P56749 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN12P56749 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLDN12P56749 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN12P56749 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN12P56749 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN12P56749 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN12P56749 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLDN12P56749 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CLDN12P56749 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN12P56749 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN12P56749 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN12P56749 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN12P56749 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN12P56749 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN12P56749 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN12P56749 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN12P56749 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN12P56749 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN12P56749 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN12P56749 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN12P56749 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN12P56749 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN12P56749 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN12P56749 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN12P56749 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN12P56749 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms