Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
THBS1P07996 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.83■□□□□ 0.45
THBS1P07996 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
THBS1P07996 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.83■□□□□ 0.45
THBS1P07996 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
THBS1P07996 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
THBS1P07996 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
THBS1P07996 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.83■□□□□ 0.45
THBS1P07996 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
THBS1P07996 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
THBS1P07996 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
THBS1P07996 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.83■□□□□ 0.44
THBS1P07996 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.83■□□□□ 0.44
THBS1P07996 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
THBS1P07996 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
THBS1P07996 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.83■□□□□ 0.44
THBS1P07996 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS1P07996 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
THBS1P07996 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
THBS1P07996 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS1P07996 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS1P07996 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS1P07996 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
THBS1P07996 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
THBS1P07996 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
THBS1P07996 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 PRKY-204ENST00000533551 1019 ntBASIC17.82■□□□□ 0.44
THBS1P07996 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.82■□□□□ 0.44
THBS1P07996 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
THBS1P07996 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS1P07996 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
THBS1P07996 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.81■□□□□ 0.44
THBS1P07996 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.81■□□□□ 0.44
THBS1P07996 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
THBS1P07996 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.81■□□□□ 0.44
THBS1P07996 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.81■□□□□ 0.44
THBS1P07996 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.81■□□□□ 0.44
THBS1P07996 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
THBS1P07996 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.81■□□□□ 0.44
THBS1P07996 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 SDHAP1-207ENST00000440850 2000 ntBASIC17.81■□□□□ 0.44
THBS1P07996 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
THBS1P07996 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS1P07996 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
THBS1P07996 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.8■□□□□ 0.44
THBS1P07996 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
THBS1P07996 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
THBS1P07996 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
THBS1P07996 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms