Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 AC009237.14-201ENST00000609975 1594 ntBASIC20.93■□□□□ 0.94
CCDC66A2RUB6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC66A2RUB6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 AL390961.4-201ENST00000623958 2535 ntBASIC20.92■□□□□ 0.94
CCDC66A2RUB6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 RARRES2P4-201ENST00000514074 484 ntBASIC20.92■□□□□ 0.94
CCDC66A2RUB6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 AIRN-201ENST00000601203 4374 ntBASIC20.92■□□□□ 0.94
CCDC66A2RUB6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC66A2RUB6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 AC137761.2-201ENST00000561729 223 ntBASIC20.91■□□□□ 0.94
CCDC66A2RUB6 AC145350.3-201ENST00000569033 163 ntBASIC20.91■□□□□ 0.94
CCDC66A2RUB6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC66A2RUB6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC66A2RUB6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC66A2RUB6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 MFSD11-216ENST00000590393 1141 ntBASIC20.89■□□□□ 0.93
CCDC66A2RUB6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.89■□□□□ 0.93
CCDC66A2RUB6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CCDC66A2RUB6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms