Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ZNF815P-204ENST00000434898 1737 ntBASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 TERF1P2-201ENST00000583350 1212 ntBASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TRDV1A0A1B0GX56 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRDV1A0A1B0GX56 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 AL162412.1-201ENST00000567129 965 ntBASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 MFSD11-216ENST00000590393 1141 ntBASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 IRX1P1-201ENST00000438849 1838 ntBASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms